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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Xkr4'

Total of fusion sequences: 8 (from 12,196,033 parsed EST/mRNAs. Last update 2021-05-29)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

XM_006495550.3
3..117
98.3%
+
1

NM_009837.1
9..605
98.9%
-
11
3
0
82
intron-exon
2
Mus musculus

XM_006495550.3
3..117
97.4%
+
1

NM_009837.1
9..419
99.6%
-
11
3
0
83
intron-exon
3
Mus musculus

XM_006495550.3
2..116
98.3%
+
1

NM_009837.1
8..686
98.6%
-
11
3
0
82
intron-exon
4
Mus musculus

NM_009837.1
42..532
99.8%
+
11

XM_006495550.3
427..541
98.3%
-
1
3
0
83
exon-intron
5
Mus musculus

XM_006502639.3
4..218
98.6%
+
4

XM_006495550.3
218..245
100.0%
-
1
1
0
0
exon-intron
6
Mus musculus
4732416N19Rik
NR_015615.1
3..109
95.0%
-
6

XM_006495550.3
4..277
96.3%
+
1
1
0
0
intron-intron
7
Mus musculus

XM_006495550.3
1..296
97.0%
-
1

NM_012028.4
122..305
96.2%
-
3
1
0
0
intron-intron
8
Mus musculus

NM_025947.3
15..662
99.9%
+
2

XM_006495550.3
629..692
95.0%
-
1
1
0
0
exon-intron

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