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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'XRN2'

Total of fusion sequences: 14 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens ChimerDB MT-RNR2
Q8IVG9
1..134
100.0%
+
MT

NM_012255.4
135..603
100.0%
+
20
1
0
0
intron-exonHS55
Homo Sapiens ChimerDB
XM_011534889.2
12..227
98.7%
+
13

NM_001317960.1
227..963
96.9%
+
20
1
0
0
exon-exon
Homo Sapiens ChimerDB
XR_001742301.2
1..408
96.1%
-
5

NM_001317960.1
409..573
97.0%
+
20
1
0
0
intron-exon
Homo Sapiens
NM_001317960.1
8..163
98.0%
+
20

XM_011516906.3
159..283
100.0%
+
8
1
0
0
exon-intron
Homo Sapiens
XM_017000864.2
16..95
97.5%
+
1

NM_001317960.1
91..387
99.4%
+
20
1
0
0
exon-exon
Homo Sapiens MALAT1
NR_144568.1
1..76
96.0%
+
11

XM_017027723.2
66..87
100.0%
+
20
1
0
0
exon-intron
Homo Sapiens
NM_001317960.1
39..443
99.1%
-
20

XR_001741980.2
440..633
95.4%
+
5
1
0
0
intron-intron
Homo Sapiens
NM_022373.4
15..38
100.0%
-
7

NM_001317960.1
32..208
97.2%
-
20
1
0
0
exon-exon
Homo Sapiens
NM_003979.3
2..305
99.7%
-
12

NM_001317960.1
301..474
100.0%
-
20
1
0
0
exon-intron
Homo Sapiens
NM_001317960.1
8..50
100.0%
-
20

NM_001317960.1
44..220
97.8%
+
20
1
0
0
exon-exon

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