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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'Vps54'

Total of fusion sequences: 9 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Mus musculus
XM_011243720.1
1..1567
100.0%
+
11
Slmo1
Q8VE85

XR_385989.3
1567..1590
100.0%
-
18
1
0
0
exon-intron
Mus musculus
NM_139297.6
10..1284
100.0%
-
11

XM_011243720.1
1285..1293
100.0%
-
11
3
2
0
exon-exon
Mus musculus
XM_011243720.1
1..11
99.8%
+
11

NM_139297.6
12..490
99.8%
+
11
3
1
0
exon-exon
Mus musculus
XM_011243720.1
1..12
99.9%
+
11

NM_139297.6
13..546
99.9%
+
11
3
1
0
exon-exon
Mus musculus
XM_006496365.3
19..654
98.6%
-
1

XM_011243720.1
627..761
95.6%
+
11
1
0
0
intron-intron
Mus musculus
NM_133887.4
53..85
100.0%
+
4

XM_011243720.1
63..476
98.6%
+
11
1
0
0
intron-intron
Mus musculus
XM_011243720.1
2..126
95.2%
+
11

XM_006506106.3
4..675
99.5%
-
6
1
0
0
intron-intron
Mus musculus
NM_027727.2
14..36
100.0%
+
18

XM_011243720.1
31..307
96.4%
-
11
1
0
0
intron-exon
Mus musculus
NM_153135.3
1..312
100.0%
-
8

XM_011243720.1
307..498
100.0%
-
11
1
0
0
intron-intron

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