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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Vps54'

Total of fusion sequences: 17 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

XM_011243720.1
1..1567
100.0%
+
11
Slmo1
Q8VE85

XR_385989.3
1567..1590
100.0%
-
18
1
0
0
exon-intron
2
Mus musculus

NM_139297.6
10..1284
100.0%
-
11

XM_011243720.1
1285..1293
100.0%
-
11
3
2
0
exon-exon
3
Mus musculus

XM_011243720.1
1..11
99.8%
+
11

NM_139297.6
12..490
99.8%
+
11
3
1
0
exon-exon
4
Mus musculus

XM_011243720.1
1..12
99.9%
+
11

NM_139297.6
13..546
99.9%
+
11
3
1
0
exon-exon
5
Homo Sapiens

XR_244939.5
1..250
100.0%
+
2
RBPMS2
Q6ZRY4

NR_138350.1
248..387
99.3%
+
15
1
0
0
intron-intron
6
Homo Sapiens

XR_244939.5
9..267
100.0%
+
2
RBPMS2
Q6ZRY4

NR_138350.1
265..410
99.4%
+
15
1
0
0
intron-intron
7
Homo Sapiens
1..60
95.0%
+
2
41..61
100.0%
-
12
1
0
0
intron-intron
8
Mus musculus

XM_006496365.3
19..654
98.6%
-
1

XM_011243720.1
627..761
95.6%
+
11
1
0
0
intron-intron
9
Mus musculus

NM_133887.4
53..85
100.0%
+
4

XM_011243720.1
63..476
98.6%
+
11
1
0
0
intron-intron
10
Mus musculus

XM_011243720.1
2..126
95.2%
+
11

XM_006506106.3
4..675
99.5%
-
6
1
0
0
intron-intron

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