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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Vps13c'

Total of fusion sequences: 8 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

XM_006511226.1
1..67
100.0%
+
9

XM_006511226.1
64..117
98.2%
-
9
1
0
0
exon-exon
2
Mus musculus
Sprr2a1
Q9CQK8

NM_011468.4
1..709
99.9%
+
3

XR_379424.1
706..732
100.0%
+
9
1
0
0
exon-intron
3
Mus musculus

NM_017471.2
21..820
99.0%
-
X

XR_379424.1
814..842
100.0%
+
9
1
0
0
intron-intron
4
Mus musculus
CT025601.1 44..481
97.5%
-
17

XR_379424.1
481..505
95.9%
+
9
1
0
0
intron-intron
5
Mus musculus

NM_009790.5
20..740
99.1%
+
12

XR_379424.1
725..751
100.0%
+
9
1
0
0
exon-intron
6
Mus musculus

XM_017315491.1
1..552
100.0%
+
13

XR_379424.1
547..576
100.0%
-
9
1
0
0
exon-intron
7
Mus musculus

XM_006530520.3
20..954
99.2%
-
8

XR_379424.1
937..962
100.0%
+
9
1
0
0
intron-intron
8
Mus musculus

NM_023865.3
17..830
99.4%
+
4

XR_379424.1
830..856
96.2%
+
9
1
0
0
exon-intron

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