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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Vkorc1'

Total of fusion sequences: 5 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_178600.2
18..138
99.2%
+
7

NM_178600.2
137..223
100.0%
-
7
1
0
0
exon-exon
2
Mus musculus

NM_178600.2
18..146
96.2%
+
7

NM_007952.2
136..195
98.4%
-
2
1
0
0
exon-exon
3
Mus musculus

XM_006520095.3
2..32
100.0%
-
15

NM_178600.2
29..751
99.9%
+
7
1
0
0
intron-exon
4
Mus musculus

NM_178600.2
1..716
99.8%
-
7
Gm16833
Q3UNY1

NR_045754.1
717..737
100.0%
+
9
1
0
0
exon-intron
5
Mus musculus

NM_178600.2
51..822
99.4%
-
7
Gm34297
XR_871988.1
559..852
97.9%
+
10
1
0
0
exon-intron

T o p