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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'VPS36'

Total of fusion sequences: 6 (from 2,544,974 parsed EST/mRNAs. Last update 2020-03-27 15:38:11)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_001282169.1
1..1184
100.0%
-
13
PAIP2B
Q9ULR5

XM_005264310.4
1185..1882
96.7%
-
2
1
0
0
intron-exon
2
Homo Sapiens

NM_016075.3
1..61
96.3%
+
13
TPTE2P3
NR_002793.1
62..112
96.3%
+
13
1
0
0
intron-intron
3
Homo Sapiens

XM_005263009.4
20..117
98.0%
-
4

NM_016075.3
64..118
96.1%
-
13
2
1
0
intron-intron
4
Homo Sapiens

XM_005263009.4
20..114
100.0%
-
4

NM_016075.3
62..115
96.0%
-
13
2
1
0
intron-intron
5
Homo Sapiens
LOC105371557
XR_934263.2
33..60
96.2%
-
17

NM_016075.3
51..103
100.0%
+
13
1
0
0
intron-intron
6
Homo Sapiens

NM_001282169.1
1..137
97.5%
+
13

NM_013952.3
130..155
100.0%
-
2
1
0
0
intron-intron

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