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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'VPS13B'

Total of fusion sequences: 33 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
21
Homo Sapiens
LOC100131294 1..489
96.0%
-
12

XM_024447074.1
483..539
100.0%
-
8
1
0
0
exon-intron
22
Homo Sapiens
38..61
95.9%
-
8
43..67
100.0%
+
8
1
0
0
intron-intron
23
Homo Sapiens

NM_001145418.1
1..321
95.5%
+
22

XM_024447074.1
15..385
98.3%
+
8
1
0
0
intron-intron
24
Homo Sapiens

XM_017016421.1
7..426
95.3%
+
10

XM_024447074.1
198..435
98.9%
-
8
1
0
0
intron-intron
25
Homo Sapiens

XM_024447074.1
20..41
100.0%
+
8

NM_000519.3
32..321
98.7%
+
11
1
0
0
intron-exon
26
Homo Sapiens
RPL37P2 1..365
95.7%
-
11

XM_024447074.1
346..402
96.5%
-
8
1
0
0
exon-intron
27
Homo Sapiens

XM_024447074.1
6..39
96.9%
+
8
CCDC167
Q9P0B6

NM_138493.2
38..360
98.8%
+
6
1
0
0
intron-exon
28
Homo Sapiens

NM_002764.3
8..335
100.0%
+
X

XM_024447074.1
328..352
100.0%
-
8
1
0
0
exon-intron
29
Homo Sapiens
LOC105369468
XR_001748361.1
1..21
100.0%
+
11

XM_024447074.1
4..65
98.4%
-
8
1
0
0
intron-intron
30
Homo Sapiens

XM_024447074.1
1..98
100.0%
+
8

XM_005262481.1
94..566
99.8%
-
X
1
0
0
intron-exon

T o p