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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'VPS13B'

Total of fusion sequences: 33 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
11
Homo Sapiens
LOC105376661 1..21
100.0%
+
11
16..35
100.0%
-
8
1
0
0
intron-intron
12
Homo Sapiens
1..69
98.6%
+
8
54..73
100.0%
+
1
1
0
0
intron-intron
13
Homo Sapiens

XM_024447074.1
1..86
95.0%
-
8

XR_001738949.2
41..148
95.9%
+
2
1
0
0
intron-intron
14
Homo Sapiens

NM_001135774.1
52..93
95.3%
-
22

XM_024447074.1
80..100
100.0%
-
8
1
0
0
intron-intron
15
Homo Sapiens

XR_947828.2
1..392
100.0%
-
11

XM_017013112.1
388..416
100.0%
-
8
1
0
0
exon-intron
16
Homo Sapiens

XM_017020922.1
1..533
99.7%
+
14

XM_024447074.1
534..628
100.0%
+
8
1
0
0
intron-intron
17
Homo Sapiens

NR_037849.1
1..93
97.8%
+
2

XM_024447074.1
83..110
100.0%
-
8
1
0
0
exon-intron
18
Homo Sapiens

NM_000477.6
1..93
100.0%
+
4

XM_024447074.1
84..452
96.1%
+
8
1
0
0
exon-intron
19
Homo Sapiens

NM_004356.3
9..319
100.0%
+
11

XM_017013112.1
319..350
96.9%
-
8
1
0
0
exon-intron
20
Homo Sapiens

XM_024447074.1
17..99
97.7%
-
8

XM_017026920.1
37..586
98.8%
+
19
1
0
0
intron-exon

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