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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'VPS13B'

Total of fusion sequences: 33 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB
XM_024447074.1
1..94
96.4%
+
8

NR_148875.1
71..577
99.9%
-
15
1
0
0
intron-exon
2
Homo Sapiens

NM_001018111.2
8..300
100.0%
-
7

XM_017013112.1
283..313
100.0%
+
8
1
0
0
exon-intron
3
Homo Sapiens

XM_024447074.1
2..32
100.0%
-
8

NM_001018111.2
15..307
99.0%
+
7
1
0
0
intron-exon
4
Homo Sapiens

XM_024447074.1
18..94
100.0%
-
8

NM_182569.3
84..778
100.0%
+
17
1
0
0
exon-exon
5
Homo Sapiens

NM_000517.4
1..536
100.0%
+
16

XM_017013112.1
536..562
100.0%
-
8
1
0
0
exon-intron
6
Homo Sapiens

XM_024447074.1
8..40
100.0%
+
8

XM_006723111.1
24..374
99.2%
+
19
1
0
0
intron-exon
7
Homo Sapiens

NM_015711.3
13..362
100.0%
+
19

XM_024447074.1
357..376
100.0%
+
8
1
0
0
exon-intron
8
Homo Sapiens

NM_001309434.1
1..722
98.2%
-
15

XM_017013112.1
348..750
98.2%
-
8
1
0
0
exon-intron
9
Homo Sapiens

NM_018648.3
2..507
99.9%
-
15

XM_017013112.1
504..531
100.0%
-
8
1
0
0
exon-intron
10
Homo Sapiens

XM_017004317.1
1..256
98.9%
+
2

XM_017013111.1
253..359
100.0%
+
8
1
0
0
intron-exon

T o p