Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'VGLL4'

Total of fusion sequences: 14 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs PDE3A
Q14432

XM_017019420.1
1..402
100.0%
+
12

XM_011534267.2
399..555
100.0%
-
3
1
0
0
exon-exon
2
Homo Sapiens
ChimerDB
NM_001128219.2
2..193
100.0%
-
3

NM_182678.2
191..908
99.5%
+
2
1
0
0
exon-exon
3
Mus musculus
SplGraphs
XM_006532358.3
1..374
100.0%
-
11

XM_006506010.1
369..720
99.8%
-
6
1
0
0
exon-exon
4
Mus musculus

XM_006506010.1
1..151
100.0%
-
6

XM_006506013.3
146..576
97.7%
-
6
0
21978
24859
exon-exon
5
Mus musculus

XM_006506010.1
1..763
100.0%
-
6

XM_006506010.1
755..1712
98.6%
-
6
0
21978
24859
intron-intron
6
Homo Sapiens

XR_940363.2
1..174
100.0%
+
3

XM_011534267.2
164..360
99.5%
-
3
0
2563
2314
intron-exon
7
Homo Sapiens

NM_001128219.2
2..96
100.0%
+
3

NM_001349232.1
86..186
99.1%
+
3
0
726
65535
exon-exon
8
Homo Sapiens

XM_011534267.2
1..244
98.0%
-
3

NM_001349232.1
240..513
96.7%
+
3
0
477
8696
exon-exon
9
Homo Sapiens

NM_001349232.1
18..113
95.8%
+
3

XM_011534267.2
104..243
100.0%
-
3
0
477
8696
exon-exon
10
Homo Sapiens

XM_011534267.2
1..415
100.0%
-
3

XR_944731.3
413..442
96.7%
+
12
1
0
0
exon-intron

T o p