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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'UBE2H'

Total of fusion sequences: 17 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network 		Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y) 		Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences		 Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript		 Start1..End1
Ident1% 		Strand1
Chrom1 		Name(s)2,
transcript		 Start2..End2
Ident2% 		Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: BE005761 FASTA
Head Gene (1) Alignment: UBE2H | OMIM: 601082 Tail Gene (2) Alignment: UBE2H | OMIM: 601082 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
73287+12991038112991063460protein-coding73287-12989069612989085910protein-coding 412 hg38
Updated: 2019-02-20
Owner: ChiTaRS
NM_001202498.1		1..246
98.4%		+
7
NM_001202498.1		241..404
98.8%		-
7		0
7129
4001		intron-intron

Hi-C contacts of chimeric junction

Fusion Gene1 chromo-
some1		 junction start1 junction end1 Hi-C point1 Δ1 Gene2 chromo-
some2		 junction start2 junction end2 Hi-C point2 Δ2 Cell lines
(Cell_ID,)		 PubMed(,s)
2319--32-825--33-34-
BE005761 UBE2H 7 129910629 129910634 129920160 9526 UBE2H 7 129890696 129890701 129890160 536 HUVEC-C (CVCL_2959) 25497547
BE005761 UBE2H 7 129910629 129910634 129920160 9526 UBE2H 7 129890696 129890701 129900160 9459 GM12878_Kyle, HUVEC-C (CVCL_2959), HAP-1 (CVCL_5G07) 25497547, 26499245
2
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: U25433 FASTA
UniProtKB: Q13166 CATR tumorigenic conversion 1 protein (CATR1.3)
Fusion Gene(s): CATR1
Head Gene (1) Alignment: UBE2H | OMIM: 601082 Tail Gene (2) Alignment: UBE2H | OMIM: 601082 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
73287+12990638012990931360protein-coding73287+12989718112989798810protein-coding 3401 hg38
Updated: 2019-02-21
Owner: ChiTaRS
NM_001202498.1		1..2600
99.7%		+
7
NM_001202498.1		2594..3401
98.7%		+
7		0
7129
4001		intron-intron
3
Mus musculus

ANNOTATION OF CHIMERA FUSION

GenBank ID: BC011107 FASTA
UniProtKB: O88851 Putative hydrolase RBBP9 (EC 3.-.-.-) (B5T-overexpressed gene protein) (Protein BOG) (Retinoblastoma-binding protein 9) (RBBP-9)
Fusion Gene(s): Rbbp9 Bog
Head Gene (1) Alignment: Rbbp9 Tail Gene (2) Alignment: Ube2h Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
264502-14454226814455079751222146+302269173022702100 2122 mm10
Updated: 2019-06-11
Owner: ChiTaRS
NM_015754.2		1..2101
99.1%		-
2
NM_009459.3		1810..2121
95.4%		+
6		1
0
0		exon-intron
4
Mus musculus

ANNOTATION OF CHIMERA FUSION

GenBank ID: BC058637 FASTA
UniProtKB: Q6PCM2 Integrator complex subunit 6 (Int6) (DBI-1) (Protein DDX26)
Fusion Gene(s): Ints6 Dbi1 Ddx26
Head Gene (1) Alignment: Ints6 Tail Gene (2) Alignment: Ube2h Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
1813014-6269300362761115181protein-coding222146-302346123023464600 4125 mm10
Updated: 2019-06-15
Owner: ChiTaRS
NM_008715.2		1..4102
100.0%		-
14
NM_009459.3		3898..4121
96.8%		-
6		1
0
0		exon-intron
5
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: AF074645 FASTA
Head Gene (1) Alignment: UBE2H | OMIM: 601082 Tail Gene (2) Alignment: CFH | OMIM: 134370 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
73287+12993757312993805660protein-coding30751-196657207196657420220oncogene,
protein-coding		 694 hg38
Updated: 2019-02-20
Owner: ChiTaRS
NM_001202498.1		1..484
100.0%		+
7
XR_001737134.2		481..694
99.1%		-
1		1
0
0		intron-intron
6
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: AI110738 FASTA
Head Gene (1) Alignment: UBE2H | OMIM: 601082 Tail Gene (2) Alignment: CFH | OMIM: 134370 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
73287+12993757312993805660protein-coding30751-196657207196657420220oncogene,
protein-coding		 694 hg38
Updated: 2019-02-20
Owner: ChiTaRS
NM_001202498.1		1..484
100.0%		+
7
XR_001737134.2		481..694
99.1%		-
1		1
0
0		intron-intron
7
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: BF844193 FASTA
Head Gene (1) Alignment: UBE2H | OMIM: 601082 Tail Gene (2) Alignment: UBE2H | OMIM: 601082 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
73287+12983101012983120011protein-coding73287-12983136412983150271protein-coding 330 hg38

Domains of the full fusion Envelope E-value Score Description
name (Pfam, InterPro, SMART) length from to
UQ_con (PF00179, IPR000608) 140 140 276 6.3e-40 122.300 Ubiquitin-conjugating enzyme
Updated: 2019-01-29
Owner: ChiTaRS
NM_001202498.1		9..197
97.9%		+
7
NM_001202498.1		191..330
97.9%		-
7		1
0
0		exon-exon
8
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: BF839267 FASTA
Head Gene (1) Alignment: UBE2H | OMIM: 601082 Tail Gene (2) Alignment: UBE2H | OMIM: 601082 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
73287+12983102412983120011protein-coding73287-12983136412983150271protein-coding 307 hg38

Domains of the full fusion Envelope E-value Score Description
name (Pfam, InterPro, SMART) length from to
UQ_con (PF00179, IPR000608) 140 140 276 6.3e-40 122.300 Ubiquitin-conjugating enzyme
Updated: 2019-02-02
Owner: ChiTaRS
NM_001202498.1		1..175
97.2%		+
7
NM_001202498.1		169..307
99.3%		-
7		1
0
0		exon-exon
9
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: DL050551 FASTA
Head Gene (1) Alignment: UBE2H | OMIM: 601082 Tail Gene (2) Alignment: HDAC9 | OMIM: 606543 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
73287+12979328212985093220protein-coding97347-1857737018906043200protein-coding 337 hg38
Updated: 2019-03-26
Owner: ChiTaRS
NM_003344.3		1..124
97.6%		+
7
NM_178423.2		43..169
96.3%		-
7		1
0
0		intron-intron
10
Homo Sapiens

ANNOTATION OF CHIMERA FUSION

GenBank ID: BG223535 FASTA
Head Gene (1) Alignment: UBE2H | OMIM: 601082 Tail Gene (2) Alignment: TBC1D22A | OMIM: 616879 Qsize UCSC
Version
Location:
 exons highlight1 Location:
 exons highlight2
Entrez
GeneID1		 chromo-
some1		 strand1 start_loc1 end_loc1 total1 overlap1 Entrez
GeneID2		 chromo-
some2		 strand2 start_loc2 end_loc2 total2 overlap2
1819720212223-24251226272829-3031
73287-12989881412989903260protein-coding2577122+470014494700147270protein-coding 241 hg38
Updated: 2019-01-31
Owner: ChiTaRS
NM_001202498.1		7..225
100.0%		-
7
XR_001755204.1		210..233
100.0%		+
22		1
0
0		intron-intron

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