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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'U2af1'

Total of fusion sequences: 5 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

XR_866011.2
21..815
98.0%
-
2

XM_006523472.1
683..838
95.0%
-
17
1
0
0
intron-intron
2
Mus musculus

XM_006523472.1
1..763
100.0%
-
17
Gm10232 33..785
99.9%
-
17
1
0
0
exon-intron
3
Mus musculus

ENSMUST00000081650
43..178
95.3%
+
15

XM_006523472.1
89..572
99.8%
-
17
1
0
0
intron-exon
4
Mus musculus

NM_001048061.1
1..59
98.4%
-
11

XM_006523472.1
55..295
100.0%
-
17
1
0
0
exon-intron
5
Mus musculus

XM_006523472.1
40..537
98.0%
-
17

NM_175388.3
53..617
96.1%
+
7
1
0
0
exon-intron

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