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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Tspan4'

Total of fusion sequences: 8 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
SplGraphs
NM_001001806.2
1..61
100.0%
-
17

XM_006536224.3
61..548
99.8%
+
7
1
0
0
exon-exon
2
Mus musculus

NM_175692.3
1..1241
99.8%
+
2

XM_006536224.3
1118..1254
95.4%
+
7
1
0
0
exon-intron
3
Mus musculus

NM_001142681.1
1..205
100.0%
-
7

XM_006536224.3
206..544
100.0%
-
7
1
0
0
exon-exon
4
Mus musculus

NM_001142681.1
1..231
100.0%
-
7

XM_006536224.3
232..567
100.0%
-
7
1
0
0
exon-exon
5
Mus musculus

XM_006536224.3
20..334
99.1%
+
7
3110039I08Rik
Q3URL6

ENSMUST00000233927
333..364
100.0%
-
9
1
0
0
exon-intron
6
Mus musculus

XM_006516552.3
1..27
100.0%
+
13

XM_006536224.3
22..445
99.8%
-
7
1
0
0
intron-exon
7
Mus musculus

XM_006536224.3
1..163
95.1%
+
7
4732471J01Rik
Q8C5J9

NR_073028.1
3..679
97.5%
-
7
1
0
0
intron-intron
8
Mus musculus

XM_006536224.3
2..31
100.0%
+
7

NM_028149.1
18..562
99.9%
+
11
1
0
0
intron-intron

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