Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'Tspan4'

Total of fusion sequences: 7 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo SapiensSplGraphs
XM_005259594.2
12..148
99.3%
-
19

NM_001025235.1
148..462
99.7%
+
11
1
0
0
exon-exon
Homo Sapiens ChimerDB RNA45S4
NR_145819.1
1..425
100.0%
+
21

NM_001025235.1
419..817
99.0%
+
11
1
0
0
exon-exonHS110
Homo Sapiens
XM_017028673.2
19..50
100.0%
+
22

NM_001025235.1
51..272
99.1%
-
11
1
0
0
intron-exon
Homo Sapiens
XM_011520239.3
1..22
100.0%
-
11

NM_001025234.1
12..413
99.8%
-
11
1
0
0
intron-exon
Homo Sapiens
NM_001025235.1
14..632
99.9%
-
11

NM_001025235.1
629..690
100.0%
+
11
1
0
0
exon-exon
Homo Sapiens
NM_003271.4
1..6
99.2%
-
11
POLR2L
P62875

NM_021128.4
7..336
99.2%
-
11
1
0
0
exon-exon
Homo Sapiens
XR_001755204.1
1..89
100.0%
+
22

NM_001025235.1
90..564
99.8%
+
11
1
0
0
exon-intron

T o p