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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Tsc1'

Total of fusion sequences: 9 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
SplGraphs
XM_011239142.2
2..309
99.4%
+
2

XM_011239142.2
305..416
100.0%
+
2
4
0
19
intron-intron
2
Homo Sapiens

XM_017015096.1
1..2502
100.0%
-
9

NM_001355017.1
2501..4146
100.0%
-
5
1
0
0
exon-exon
3
Mus musculus

XM_011239142.2
1..143
100.0%
-
2

XM_011239142.2
138..413
99.0%
-
2
4
1
41
intron-intron
4
Mus musculus

XM_011239142.2
1..143
100.0%
-
2

XM_011239142.2
138..618
100.0%
-
2
4
0
206
intron-intron
5
Mus musculus

XM_011239142.2
2..291
97.3%
+
2

XM_011239142.2
287..398
100.0%
+
2
4
0
19
intron-intron
6
Mus musculus

XM_011247499.1
29..738
99.3%
+
X

XM_011239142.2
572..815
95.3%
+
2
1
0
0
intron-intron
7
Homo Sapiens
LINC00854
ENST00000433702
1..66
100.0%
-
17

XM_017015097.1
64..552
100.0%
-
9
1
0
0
intron-exon
8
Mus musculus

XM_017319201.1
3..657
98.7%
+
2

XM_011239142.2
641..681
96.9%
+
2
1
0
0
exon-intron
9
Homo Sapiens
HLA-F-AS1
NR_026972.1
24..126
99.1%
-
6

XM_017015097.1
123..279
98.1%
+
9
1
0
0
intron-exon

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