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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Trappc12'

Total of fusion sequences: 6 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

XR_001738762.1
12..361
98.3%
+
2
ABL2
P42684

NM_001136000.2
350..446
99.0%
-
1
1
0
0
exon-exon
2
Homo Sapiens

XR_001738762.1
12..361
98.3%
+
2
ABL2
P42684

NM_001136000.2
350..446
99.0%
-
1
1
0
0
exon-exon
3
Homo Sapiens

NM_016030.5
1..472
98.8%
-
2

XM_017012684.2
471..496
100.0%
+
7
1
0
0
exon-intron
4
Homo Sapiens

NM_016030.5
1..417
98.6%
-
2
SMG5
Q9UPR3

NM_001323616.1
411..431
100.0%
-
1
1
0
0
exon-intron
5
Homo Sapiens

XM_017004257.1
17..286
95.7%
+
2
XGY1 266..307
96.8%
-
Y
1
0
0
intron-intron
6
Homo Sapiens

XR_001738761.1
3..403
100.0%
+
2

NM_001145775.2
399..576
100.0%
-
6
1
0
0
exon-exon

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