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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Traf3'

Total of fusion sequences: 8 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_173863.2
13..3418
99.7%
-
7

XM_006515798.2
3241..3426
96.3%
-
12
1
0
0
exon-intron
2
Mus musculus
Spink1
P09036

NM_009258.5
32..362
99.4%
-
18

XM_006515798.2
362..387
97.9%
+
12
1
0
0
exon-intron
3
Mus musculus
Gm9794
XR_140792.4
26..528
99.7%
-
6

XM_006515798.2
514..544
96.8%
-
12
1
0
0
exon-intron
4
Mus musculus

XM_006515798.2
3..26
98.9%
-
12

NM_001081057.2
27..449
98.9%
-
12
1
0
0
intron-exon
5
Mus musculus

XM_006515798.2
1..325
97.6%
-
12

NM_008729.2
18..710
96.8%
-
15
1
0
0
intron-exon
6
Mus musculus

NM_001311101.1
24..486
100.0%
+
9

XM_006515798.2
487..517
96.8%
-
12
1
0
0
exon-intron
7
Mus musculus
Gm7743 22..671
96.5%
+
X

XM_006515798.2
664..696
96.7%
-
12
1
0
0
exon-intron
8
Mus musculus

NM_026350.3
19..99
96.8%
+
8

XM_006515798.2
98..624
99.1%
+
12
1
0
0
intron-exon

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