Result for the search of Gene Name/NCBI ID(s): 'Tgfb2'

Total of fusion sequences: 6 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Mus musculus	SplGraphs BY028426 ANNOTATION OF CHIMERA FUSION GenBank ID: BY028426 FASTA Head Gene (1) Alignment: Spen Tail Gene (2) Alignment: Tgfb2 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 56381 4 - 141478988 141479139 1 1 protein-coding 21808 1 - 186625498 186628999 2 1 protein-coding 378 mm10 Updated: 2019-05-28 Owner: ChiTaRS	Spen A2ADB0 A2ADB1 Q3UV27 Q62504 XM_006539073.3	1..152 100.0%	- 4	Tgfb2 A0A0A6YXU9 P27090 Q3TWH5 Q6ZY28 Q8CDZ9 Q921T1 XM_006497136.3	153..378 99.6%	- 1	1 0 0	exon-exon
2 Mus musculus	BC011055 ANNOTATION OF CHIMERA FUSION GenBank ID: BC011055 FASTA UniProtKB: Q921T1 Tgfb2 protein Fusion Gene(s): Tgfb2 Head Gene (1) Alignment: 2610203C22Rik Tail Gene (2) Alignment: Tgfb2 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 72481 1 - 9619550 9619640 1 1 ncRNA 21808 1 - 186624226 186632812 5 1 protein-coding 2047 mm10 Updated: 2019-06-11 Owner: ChiTaRS	2610203C22Rik NR_015470.1	1..91 100.0%	- 1	Tgfb2 A0A0A6YXU9 P27090 Q3TWH5 Q6ZY28 Q8CDZ9 Q921T1 XM_006497136.3	90..2046 100.0%	- 1	1 0 0	exon-exon
3 Mus musculus	DV071852 ANNOTATION OF CHIMERA FUSION GenBank ID: DV071852 FASTA Head Gene (1) Alignment: Tgfb2 Tail Gene (2) Alignment: Atp13a3 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 21808 1 - 186624943 186625525 1 1 protein-coding 224088 16 - 30373524 30373902 0 0 protein-coding 946 mm10 Updated: 2019-06-16 Owner: ChiTaRS	Tgfb2 A0A0A6YXU9 P27090 Q3TWH5 Q6ZY28 Q8CDZ9 Q921T1 XM_006497136.3	19..434 99.6%	- 1	Atp13a3 A0A2R8VI02 A0A2R8VJX0 Q3UM98 Q5XF89 NM_001128096.1	379..496 97.3%	- 16	1 0 0	exon-intron
4 Mus musculus	BQ032167 ANNOTATION OF CHIMERA FUSION GenBank ID: BQ032167 FASTA Head Gene (1) Alignment: mt-Cytb Tail Gene (2) Alignment: Tgfb2 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 17711 MT - 14147 14295 0 0 21808 1 - 186622920 186623131 1 1 protein-coding 364 mm10 Updated: 2019-06-12 Owner: ChiTaRS	mt-Cytb A0A023NCR8 A0A023NCS0 A0A023ND59 A0A023NDP0 A0A023NDP5 A0A023NDQ1 A0A023NE65 A0A023NE78 A0A075DCW5 A0A0K1W397 A0A0U2QFD1 A0A0U2REU1 A0A0U3AJS9 A0A141CM53 A0A1E1F976 A0A1E1F981 A0A1E1F982 A0A1E1F983 A0A1E1F984 A0A1E1F987 A0A1E1F990 A0A1E1F993 A0A1E1F999 A0A1E1F9C3 A0A1L5YEL9 A0A1S6PXL0 A0A1S6PXL1 A0A1S6PXL4 A0A1S6PXL6 A0A1S6PXL7 A0A1S6PXN0 A0A1S6PXN4 A0A1S6PXN5 A0A286KA21 A0A2Z6I6N3 A0A2Z6I6U6 A0A2Z6IA25 A0A3G2LU46 A0A455R6F4 A0A455R782 A0A455RDV4 A0A4P2VRD2 A3R3Q8 B0LAD5 B1P8W3 B3Y998 E3VQ38 G3EBA2 G9B4G3 G9B4G5 G9B4H2 G9B4I1 G9B4I2 H8Y1I5 L0L1W8 L0L4K0 L0L4R1 P00158 Q36290 Q3V2F9 Q3V2T7 Q5VI45 Q71EK3 Q7JCZ3 Q9TDS6 R9TNV1 U6C6V7 U6C6V9 U6C7D9 U6C7E5 U6C8B6 U6C8B8 V9TN76 V9TP20 V9TP30 V9TQ89 V9TRK2 W0SLU4 W0SMJ3	19..168 97.4%	- MT	Tgfb2 A0A0A6YXU9 P27090 Q3TWH5 Q6ZY28 Q8CDZ9 Q921T1 XM_006497136.3	153..364 99.1%	- 1	1 0 0	intron-exon
5 Mus musculus	AA518312 ANNOTATION OF CHIMERA FUSION GenBank ID: AA518312 FASTA Head Gene (1) Alignment: Cp Tail Gene (2) Alignment: Tgfb2 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 12870 3 + 20001671 20001859 0 0 protein-coding 21808 1 - 186623307 186623643 1 1 protein-coding 533 mm10 Updated: 2019-05-28 Owner: ChiTaRS	Cp E9PZD8 G3UWP5 G3UXD2 G3UXG1 G3UZ53 G3X8Q5 G3X9T8 Q2F3J4 Q61147 Q8BU82 Q8BV37 XM_006535381.3	1..188 99.0%	+ 3	Tgfb2 A0A0A6YXU9 P27090 Q3TWH5 Q6ZY28 Q8CDZ9 Q921T1 XM_006497136.3	180..513 97.6%	- 1	1 0 0	intron-exon
6 Mus musculus	BC094425 ANNOTATION OF CHIMERA FUSION GenBank ID: BC094425 FASTA Head Gene (1) Alignment: Sel1l2 Tail Gene (2) Alignment: Tgfb2 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 228684 2 - 140319239 140319735 0 0 21808 1 + 185910960 186639144 5 0 protein-coding 4160 mm10 Updated: 2019-06-15 Owner: ChiTaRS	Sel1l2 B0QZY1 B9EKJ8 Q3V172 NM_001033296.2	1..474 95.3%	- 2	Tgfb2 A0A0A6YXU9 P27090 Q3TWH5 Q6ZY28 Q8CDZ9 Q921T1 XM_006497136.3	6..2771 95.6%	+ 1	1 0 0	intron-intron

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