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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Tcf12'

Total of fusion sequences: 12 (from 3,531,238 parsed EST/mRNAs. Last update 2020-07-10 14:21:01)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
SplGraphs
NM_016709.2
1..445
100.0%
-
13

XM_006511000.3
437..555
100.0%
-
9
1
0
0
intron-exon
2
Mus musculus

XM_006511000.3
9..45
100.0%
-
9

NM_001039483.1
46..674
100.0%
+
1
1
0
0
exon-exon
3
Mus musculus

XM_006510480.1
10..603
99.9%
+
9

XM_006511000.3
563..666
96.3%
+
9
1
0
0
exon-intron
4
Mus musculus

NM_019752.3
1..109
100.0%
-
6

XM_006511000.3
84..124
96.9%
-
9
1
0
0
exon-intron
5
Mus musculus
Gm14094 19..672
95.5%
+
2

XM_006511000.3
20..778
98.4%
+
9
1
0
0
intron-intron
6
Mus musculus

NM_027879.2
1..811
99.9%
-
10

XM_006511000.3
801..863
96.5%
+
9
1
0
0
exon-intron
7
Mus musculus

NM_001302163.1
1..938
99.9%
+
8

XM_006511000.3
939..977
100.0%
+
9
1
0
0
exon-intron
8
Mus musculus

XM_006511000.3
1..460
99.4%
-
9
Stk11ip
Q3TAA7

NM_027886.3
460..600
100.0%
+
1
1
0
0
intron-exon
9
Mus musculus
10..621
98.7%
+
MT

XM_006511000.3
605..672
97.0%
-
9
1
0
0
intron-intron
10
Mus musculus

XM_017319508.1
55..674
99.9%
+
3

XM_006511000.3
675..704
96.3%
+
9
1
0
0
exon-intron

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