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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'TSPAN4'

Total of fusion sequences: 7 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
XM_005259594.2
12..148
99.3%
-
19

NM_001025235.1
148..462
99.7%
+
11
1
0
0
exon-exon
2
Homo Sapiens
ChimerDB RNA45S4
NR_145819.1
1..425
100.0%
+
21

NM_001025235.1
419..817
99.0%
+
11
1
0
0
exon-exonHS110
3
Homo Sapiens

XM_017028673.2
19..50
100.0%
+
22

NM_001025235.1
51..272
99.1%
-
11
1
0
0
intron-exon
4
Homo Sapiens

XM_011520239.3
1..22
100.0%
-
11

NM_001025234.1
12..413
99.8%
-
11
1
0
0
intron-exon
5
Homo Sapiens

NM_001025235.1
14..632
99.9%
-
11

NM_001025235.1
629..690
100.0%
+
11
1
0
0
exon-exon
6
Homo Sapiens

NM_003271.4
1..6
99.2%
-
11
POLR2L
P62875

NM_021128.4
7..336
99.2%
-
11
1
0
0
exon-exon
7
Homo Sapiens

XR_001755204.1
1..89
100.0%
+
22

NM_001025235.1
90..564
99.8%
+
11
1
0
0
exon-intron

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