Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'TSPAN3'

Total of fusion sequences: 17 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_054027.5
1..1490
99.9%
-
5

XM_017021857.1
1485..1958
99.8%
-
15
1
0
0
exon-exon
2
Homo Sapiens
SplGraphs
NM_001201479.1
1..221
99.6%
-
16

XM_017021857.1
219..558
99.8%
-
15
1
0
0
intron-exon
3
Homo Sapiens
ChimerDB
NM_005724.5
1..1357
100.0%
-
15
FLRT2
O43155

XM_017021133.1
1353..2459
100.0%
+
14
1
0
0
exon-exon
4
Mus musculus

NM_019793.3
1..1707
100.0%
-
9

XR_001782603.1
1706..1725
100.0%
+
19
3
0
0
exon-intron
5
Mus musculus

NM_019793.3
1..1729
100.0%
-
9

XR_001782603.1
1728..1747
100.0%
+
19
3
0
0
exon-intron
6
Homo Sapiens

XM_017021857.1
17..185
99.5%
+
15

XM_017021857.1
175..405
100.0%
-
15
0
6073
9767
exon-exon
7
Homo Sapiens

XM_017021857.1
21..243
97.7%
+
15

XM_017021857.1
234..413
98.9%
-
15
0
6073
9767
exon-exon
8
Mus musculus

XR_001782603.1
1..28
100.0%
-
19

NM_019793.3
27..335
99.4%
+
9
3
8
0
intron-exon
9
Homo Sapiens

XM_017029240.1
20..58
100.0%
-
X

XM_017021857.1
56..252
99.0%
+
15
1
0
0
intron-exon
10
Mus musculus

NM_008302.3
1..177
98.9%
-
17

ENSMUST00000214970
174..514
100.0%
-
9
1
0
0
exon-exon

T o p