Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'TSPAN3'

Total of fusion sequences: 10 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo SapiensSplGraphs
NM_054027.5
1..1490
99.9%
-
5

XM_017021857.1
1485..1958
99.8%
-
15
1
0
0
exon-exon
Homo SapiensSplGraphs
NM_001201479.1
1..221
99.6%
-
16

XM_017021857.1
219..558
99.8%
-
15
1
0
0
intron-exon
Homo Sapiens ChimerDB
NM_005724.5
1..1357
100.0%
-
15
FLRT2
O43155

XM_017021133.1
1353..2459
100.0%
+
14
1
0
0
exon-exon
Homo Sapiens
XM_017021857.1
21..243
97.7%
+
15

XM_017021857.1
234..413
98.9%
-
15
0
6073
9767
exon-exon
Homo Sapiens
XM_017021857.1
17..185
99.5%
+
15

XM_017021857.1
175..405
100.0%
-
15
0
6073
9767
exon-exon
Homo Sapiens
XM_017029240.1
20..58
100.0%
-
X

XM_017021857.1
56..252
99.0%
+
15
1
0
0
intron-exon
Homo Sapiens
NM_005724.5
22..32
98.0%
-
15
KRT8P3 31..97
100.0%
+
8
1
0
0
exon-exon
Homo Sapiens
ENST00000267970
42..101
97.0%
-
15

XM_011530436.3
50..457
97.6%
-
22
1
0
0
intron-exon
Homo Sapiens
XM_017021857.1
1..143
98.0%
+
15
AC092162.2 138..157
100.0%
+
2
1
0
0
exon-intron
Homo Sapiens
XM_017021857.1
12..762
99.8%
-
15

XM_011524022.2
745..769
100.0%
-
17
1
0
0
exon-exon

T o p