Search Database Collection

Result for the search: Gene Name/NCBI ID(s): 'TSPAN3'

Total of fusion sequences: 8 (from 393,531 parsed EST/mRNAs. Last update 2018-11-20)

Organism	Fusion: Graphical View, Annotation, PPI	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed, iHOP reference
		Name(s)1	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,17	8	9,10,11	12,25	13,14,15	16	17
Homo Sapiens	SplGraphs DA612149 ANNOTATION OF CHIMERA FUSION GenBank ID: DA612149 FASTA Head Gene (1) Alignment: PAM16 | OMIM: 614336 Tail Gene (2) Alignment: TSPAN3 | OMIM: 613134 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 51025 16 - 4390965 4401294 NA NA protein-coding 10099 15 - 77346551 77348599 NA NA protein-coding NA hg19 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Pam16 (PF03656) 127 52 126 2.6e-23 68.700 Pam16 Tetraspannin (PF00335, IPR018499) 208 118 336 7.8e-47 145.900 Tetraspanin family Hum_adeno_E3A (PF05393, IPR008652) 100 295 350 0.00011 8.500 Human adenovirus early E3A glycoprotein Updated: 2012-12-12 Owner: ChiTaRS	PAM16 A0A0B4J298 I3L0X9 I3L1K9 I3L1U7 I3L3G8 I3L3T0 Q9Y3D7	1..221 99.6%	- 16	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637	219..558 99.8%	- 15	1 0 0
Homo Sapiens	SplGraphs AK222631 ANNOTATION OF CHIMERA FUSION GenBank ID: AK222631 FASTA UniProtKB: Q53HE9 Ankylosis, progressive homolog (Fragment) Head Gene (1) Alignment: ANKH | OMIM: 605145 Tail Gene (2) Alignment: TSPAN3 | OMIM: 613134 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 56172 5 - 14711324 14871585 NA NA protein-coding 10099 15 - 77338370 77338843 NA NA protein-coding NA hg19 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to ANKH (PF07260, IPR009887) 345 10 354 5.2e-223 725.400 Progressive ankylosis protein (ANKH) Updated: 2012-12-12 Owner: ChiTaRS	ANKH D6RGI5 Q9HCJ1	1..1490 99.9%	- 5	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637	1485..1958 99.8%	- 15	1 0 0
Homo Sapiens	ChimerDB AK095520 ANNOTATION OF CHIMERA FUSION GenBank ID: AK095520 FASTA Head Gene (1) Alignment: TSPAN3 | OMIM: 613134 Tail Gene (2) Alignment: FLRT2 | OMIM: 604807 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 10099 15 - 77338661 77363451 NA NA protein-coding 23768 14 + 86093150 86094258 NA NA protein-coding NA hg19 Updated: 2012-12-12 Owner: ChiTaRS	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637	1..1357 100.0%	- 15	FLRT2 O43155	1353..2459 100.0%	+ 14	1 0 0
Homo Sapiens	BI495238 ANNOTATION OF CHIMERA FUSION GenBank ID: BI495238 FASTA Head Gene (1) Alignment: IL1RAPL1 | OMIM: 300206 Tail Gene (2) Alignment: TSPAN3 | OMIM: 613134 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 11141 X - 29801045 29801083 1 0 protein-coding 10099 15 + 77046028 77046224 1 0 protein-coding 259 hg38 Updated: 2018-11-03 Owner: ChiTaRS	IL1RAPL1 A0A0A0MR17 Q7Z2H0 Q7Z2K4 Q9NZN1 X5DNQ7	20..58 100.0%	- X	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637	56..252 99.0%	+ 15	1 0 0
Homo Sapiens	CB242294 ANNOTATION OF CHIMERA FUSION GenBank ID: CB242294 FASTA Head Gene (1) Alignment: TSPAN3 | OMIM: 613134 Tail Gene (2) Alignment: TSPAN3 | OMIM: 613134 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 10099 15 + 77338370 77338538 NA NA protein-coding 10099 15 - 77338490 77338720 NA NA protein-coding NA hg19 Updated: 2012-12-12 Owner: ChiTaRS	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637	17..185 99.5%	+ 15	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637	175..405 100.0%	- 15	0 6073 9767
Homo Sapiens	W28286 ANNOTATION OF CHIMERA FUSION GenBank ID: W28286 FASTA Head Gene (1) Alignment: TSPAN3 | OMIM: 613134 Tail Gene (2) Alignment: TSPAN3 | OMIM: 613134 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 10099 15 + 77348137 77348559 NA NA protein-coding 10099 15 - 77339158 77344793 NA NA protein-coding NA hg19 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Tetraspannin (PF00335, IPR018499) 208 9 109 1.3e-21 63.500 Tetraspanin family DUF2244 (PF10003, IPR019253) 138 184 225 5e-05 9.200 Integral membrane protein (DUF2244) DUF2892 (PF11127, IPR021309) 66 191 260 0.00035 6.900 Protein of unknown function (DUF2892) Hum_adeno_E3A (PF05393, IPR008652) 100 378 432 0.00015 8.000 Human adenovirus early E3A glycoprotein Updated: 2012-12-12 Owner: ChiTaRS	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637	21..243 97.7%	+ 15	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637	234..413 98.9%	- 15	0 6073 9767
Homo Sapiens	T11622 ANNOTATION OF CHIMERA FUSION GenBank ID: T11622 FASTA Head Gene (1) Alignment: TSPAN3 | OMIM: 613134 Tail Gene (2) Alignment: RPL29P8 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 10099 15 + 77046345 77046487 1 0 protein-coding 100131991 2 + 176731761 176731780 1 0 pseudo 246 hg38 Updated: 2018-10-30 Owner: ChiTaRS	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637	1..143 98.0%	+ 15	RPL29P8	138..157 100.0%	+ 2	1 0 0
Homo Sapiens	CD652983 ANNOTATION OF CHIMERA FUSION GenBank ID: CD652983 FASTA Head Gene (1) Alignment: TSPAN3 | OMIM: 613134 Tail Gene (2) Alignment: DRC3 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 10099 15 - 77046753 77056225 6 0 protein-coding 83450 17 - 18008887 18008933 2 0 protein-coding 769 hg38 Updated: 2018-06-11 Owner: ChiTaRS	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637	12..762 99.8%	- 15	DRC3 D3DXC5 J3KRB8 J3KRN8 J3QR90 J3QRC9 J3QRH8 J3QS14 J3QSG4 K7EJT6 L8E869 Q9H069	745..769 100.0%	- 17	1 0 0