Result for the search of Gene Name/NCBI ID(s): 'TSPAN3'

Total of fusion sequences: 10 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	SplGraphs AK222631 ANNOTATION OF CHIMERA FUSION GenBank ID: AK222631 FASTA UniProtKB: Q53HE9 Ankylosis, progressive homolog (Fragment) Head Gene (1) Alignment: ANKH | OMIM: 605145 Tail Gene (2) Alignment: TSPAN3 | OMIM: 613134 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 56172 5 - 14711215 14871476 12 1 protein-coding 10099 15 - 77046028 77046501 7 1 protein-coding 1979 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to ANKH (PF07260, IPR009887) 345 10 354 5.2e-223 725.400 Progressive ankylosis protein (ANKH) Updated: 2019-02-20 Owner: ChiTaRS	ANKH A0A2R8Y5E7 D6RGI5 Q9HCJ1 NM_054027.5	1..1490 99.9%	- 5	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637 XM_017021857.1	1485..1958 99.8%	- 15	1 0 0	exon-exon
2 Homo Sapiens	SplGraphs DA612149 ANNOTATION OF CHIMERA FUSION GenBank ID: DA612149 FASTA Head Gene (1) Alignment: CORO7-PAM16 Tail Gene (2) Alignment: TSPAN3 | OMIM: 613134 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 100529144 16 - 4340964 4351293 4 0 protein-coding 10099 15 - 77054209 77056257 4 1 protein-coding 558 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Pam16 (PF03656) 127 52 126 2.6e-23 68.700 Pam16 Tetraspannin (PF00335, IPR018499) 208 118 336 7.8e-47 145.900 Tetraspanin family Hum_adeno_E3A (PF05393, IPR008652) 100 295 350 0.00011 8.500 Human adenovirus early E3A glycoprotein Updated: 2019-02-21 Owner: ChiTaRS	CORO7-PAM16 A0A0A6YYL4 I3L167 NM_001201479.1	1..221 99.6%	- 16	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637 XM_017021857.1	219..558 99.8%	- 15	1 0 0	intron-exon
3 Homo Sapiens	ChimerDB AK095520 ANNOTATION OF CHIMERA FUSION GenBank ID: AK095520 FASTA Head Gene (1) Alignment: TSPAN3 | OMIM: 613134 Tail Gene (2) Alignment: FLRT2 | OMIM: 604807 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 10099 15 - 77046319 77071109 7 1 protein-coding 23768 14 + 85626806 85627914 1 1 protein-coding 2459 hg38 Updated: 2019-02-20 Owner: ChiTaRS	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637 NM_005724.5	1..1357 100.0%	- 15	FLRT2 O43155 XM_017021133.1	1353..2459 100.0%	+ 14	1 0 0	exon-exon
4 Homo Sapiens	W28286 ANNOTATION OF CHIMERA FUSION GenBank ID: W28286 FASTA Head Gene (1) Alignment: TSPAN3 | OMIM: 613134 Tail Gene (2) Alignment: TSPAN3 | OMIM: 613134 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 10099 15 + 77055795 77056217 7 1 protein-coding 10099 15 - 77046816 77052451 7 1 protein-coding 813 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Tetraspannin (PF00335, IPR018499) 208 9 109 1.3e-21 63.500 Tetraspanin family DUF2244 (PF10003, IPR019253) 138 184 225 5e-05 9.200 Integral membrane protein (DUF2244) DUF2892 (PF11127, IPR021309) 66 191 260 0.00035 6.900 Protein of unknown function (DUF2892) Hum_adeno_E3A (PF05393, IPR008652) 100 378 432 0.00015 8.000 Human adenovirus early E3A glycoprotein Updated: 2019-02-21 Owner: ChiTaRS	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637 XM_017021857.1	21..243 97.7%	+ 15	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637 XM_017021857.1	234..413 98.9%	- 15	0 6073 9767	exon-exon
5 Homo Sapiens	CB242294 ANNOTATION OF CHIMERA FUSION GenBank ID: CB242294 FASTA Head Gene (1) Alignment: TSPAN3 | OMIM: 613134 Tail Gene (2) Alignment: TSPAN3 | OMIM: 613134 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 10099 15 + 77046028 77046196 1 1 protein-coding 10099 15 - 77046148 77046378 7 1 protein-coding 414 hg38 Updated: 2019-02-21 Owner: ChiTaRS	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637 XM_017021857.1	17..185 99.5%	+ 15	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637 XM_017021857.1	175..405 100.0%	- 15	0 6073 9767	exon-exon
6 Homo Sapiens	BI495238 ANNOTATION OF CHIMERA FUSION GenBank ID: BI495238 FASTA Head Gene (1) Alignment: IL1RAPL1 | OMIM: 300206 Tail Gene (2) Alignment: TSPAN3 | OMIM: 613134 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 11141 X - 29801045 29801083 6 0 protein-coding 10099 15 + 77046028 77046224 7 1 protein-coding 259 hg38 Updated: 2019-02-17 Owner: ChiTaRS	IL1RAPL1 A0A0A0MR17 A0A346RP49 Q7Z2H0 Q7Z2K4 Q9NZN1 X5DNQ7 XM_017029240.1	20..58 100.0%	- X	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637 XM_017021857.1	56..252 99.0%	+ 15	1 0 0	intron-exon
7 Homo Sapiens	EC572528 ANNOTATION OF CHIMERA FUSION GenBank ID: EC572528 FASTA Head Gene (1) Alignment: TSPAN3 | OMIM: 613134 Tail Gene (2) Alignment: KRT8P3 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 10099 15 - 77045961 77045971 1 1 protein-coding 728638 8 + 61578950 61579016 1 1 pseudo 103 hg38 Updated: 2019-03-27 Owner: ChiTaRS	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637 NM_005724.5	22..32 98.0%	- 15	KRT8P3	31..97 100.0%	+ 8	1 0 0	exon-exon
8 Homo Sapiens	CB050124 ANNOTATION OF CHIMERA FUSION GenBank ID: CB050124 FASTA Head Gene (1) Alignment: TSPAN3 | OMIM: 613134 Tail Gene (2) Alignment: ZNRF3 | OMIM: 612062 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 10099 15 - 77080598 77080793 0 0 protein-coding 84133 22 - 29054837 29055244 1 1 protein-coding 457 hg38 Updated: 2019-04-13 Owner: ChiTaRS	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637 ENST00000267970	42..101 97.0%	- 15	ZNRF3 Q96GS9 Q9ULT6 XM_011530436.3	50..457 97.6%	- 22	1 0 0	intron-exon
9 Homo Sapiens	T11622 ANNOTATION OF CHIMERA FUSION GenBank ID: T11622 FASTA Head Gene (1) Alignment: TSPAN3 | OMIM: 613134 Tail Gene (2) Alignment: AC092162.2 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 10099 15 + 77046345 77046487 1 1 protein-coding 4294900405 2 + 176731761 176731780 0 0 246 hg38 Updated: 2019-02-08 Owner: ChiTaRS	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637 XM_017021857.1	1..143 98.0%	+ 15	AC092162.2	138..157 100.0%	+ 2	1 0 0	exon-intron
10 Homo Sapiens	CD652983 ANNOTATION OF CHIMERA FUSION GenBank ID: CD652983 FASTA Head Gene (1) Alignment: TSPAN3 | OMIM: 613134 Tail Gene (2) Alignment: DRC3 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 10099 15 - 77046753 77056225 7 1 protein-coding 83450 17 - 18008887 18008933 1 1 protein-coding 769 hg38 Updated: 2019-02-17 Owner: ChiTaRS	TSPAN3 H0YKJ9 H0YMH8 L8E893 O60637 XM_017021857.1	12..762 99.8%	- 15	DRC3 D3DXC5 J3KRB8 J3KRN8 J3QR90 J3QRC9 J3QRH8 J3QS14 J3QSG4 K7EJT6 L8E869 Q9H069 XM_011524022.2	745..769 100.0%	- 17	1 0 0	exon-exon

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