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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'TSPAN16'

Total of fusion sequences: 9 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_012466.3
9..1048
99.9%
+
19

NM_001184705.2
1047..1841
99.5%
+
4
1
0
0
exon-exon
2
Homo Sapiens

NR_104199.1
4..170
98.9%
+
19

NM_012466.3
165..332
95.8%
+
19
1
0
0
intron-intron
3
Homo Sapiens

XM_024451658.1
1..35
98.3%
+
19

NM_001282509.1
36..117
98.3%
+
19
1
0
0
intron-intron
4
Homo Sapiens

NM_004283.3
1..45
95.6%
-
19

NM_012466.3
39..237
99.5%
+
19
1
0
0
exon-intron
5
Homo Sapiens

NM_001005386.2
19..189
100.0%
+
2

NM_001282509.1
117..206
97.6%
-
19
1
0
0
exon-intron
6
Homo Sapiens
1..126
95.2%
-
19
109..129
100.0%
-
10
1
0
0
intron-intron
7
Homo Sapiens

NR_104199.1
32..273
100.0%
+
19

NM_001429.3
273..339
100.0%
-
22
1
0
0
intron-exon
8
Homo Sapiens

XM_006718828.4
1..34
100.0%
-
11

NM_012466.3
26..214
99.5%
+
19
1
0
0
intron-intron
9
Homo Sapiens

NM_001005360.2
356..427
95.2%
+
19

NM_001282509.1
428..623
95.2%
+
19
1
0
0
intron-intron

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