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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'TRPS1'

Total of fusion sequences: 28 (from 1,493,742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
21
Homo Sapiens
1..106
98.1%
-
8
88..107
100.0%
+
16
1
0
0
intron-intron
22
Homo Sapiens

XM_011517264.2
1..328
100.0%
-
8
PVT1
NR_003367.3
327..428
100.0%
-
8
1
0
0
intron-intron
23
Homo Sapiens

XM_011530554.2
23..54
100.0%
+
22

XM_011517264.2
46..598
99.9%
+
8
1
0
0
intron-intron
24
Homo Sapiens

XM_011517264.2
1..24
100.0%
+
8

NM_001352275.1
13..107
97.9%
+
16
1
0
0
intron-exon
25
Homo Sapiens

XM_011517264.2
14..156
100.0%
+
8
PCGF5
Q86SE9

XM_011540271.3
148..488
99.2%
+
10
1
0
0
intron-intron
26
Homo Sapiens

XM_011517264.2
2..30
100.0%
-
8

XM_005263372.3
24..216
99.0%
+
4
1
0
0
exon-exon
27
Homo Sapiens

XM_005268325.4
16..96
97.6%
-
13

XM_011517264.2
87..266
100.0%
+
8
1
0
0
exon-intron
28
Homo Sapiens

XR_931766.3
18..45
100.0%
+
15

XM_011517264.2
27..597
98.3%
+
8
1
0
0
intron-exon

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