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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'TRPS1'

Total of fusion sequences: 14 (from 1732439 parsed EST/mRNAs. Last update 2020-01-20 12:26:08)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
SplGraphs
NM_001040396.2
1..325
97.6%
+
3

NM_001310485.1
306..471
100.0%
-
15
1
0
0
exon-exon
2
Mus musculus

NM_001310485.1
3..76
100.0%
+
15

NM_001310485.1
77..434
100.0%
-
15
2
245
697
exon-exon
3
Mus musculus

NM_001310485.1
36..334
98.4%
+
15

NM_001310485.1
327..761
99.8%
-
15
2
245
697
exon-exon
4
Mus musculus

XM_006540090.2
1..1297
99.4%
-
7

NM_001310485.1
1289..1325
100.0%
-
15
1
0
0
intron-intron
5
Mus musculus
Spink1
P09036

NM_009258.5
20..381
98.8%
-
18

NM_001310485.1
380..407
100.0%
-
15
1
0
0
exon-intron
6
Mus musculus
Ifitm3
Q9CQW9

NM_025378.2
46..717
100.0%
-
7

NM_001310485.1
713..751
100.0%
-
15
1
0
0
intron-intron
7
Mus musculus
Tpt1-ps3 25..483
98.7%
-
6

NM_001310485.1
473..492
100.0%
+
15
1
0
0
intron-intron
8
Mus musculus

NM_025628.2
19..482
100.0%
-
7

NM_001310485.1
447..512
97.9%
-
15
1
0
0
exon-intron
9
Mus musculus

NM_031997.4
26..403
99.8%
+
19

NM_001310485.1
393..420
100.0%
-
15
1
0
0
exon-intron
10
Mus musculus

NM_001310485.1
25..898
96.1%
-
15
Hacd2
Q9D3B1

NM_023587.2
885..916
100.0%
-
16
1
0
0
intron-intron

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