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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'TRPS1'

Total of fusion sequences: 41 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
XM_011517264.2
18..388
100.0%
-
8

NM_015691.3
387..581
100.0%
+
X
1
0
0
exon-exon
2
Mus musculus
SplGraphs
NM_001040396.2
1..325
97.6%
+
3

NM_001310485.1
306..471
100.0%
-
15
1
0
0
exon-exon
3
Mus musculus

NM_001310485.1
3..76
100.0%
+
15

NM_001310485.1
77..434
100.0%
-
15
2
245
697
exon-exon
4
Mus musculus

NM_001310485.1
36..334
98.4%
+
15

NM_001310485.1
327..761
99.8%
-
15
2
245
697
exon-exon
5
Homo Sapiens

XM_017011644.2
1..110
97.3%
+
7

XM_011517264.2
97..2596
100.0%
-
8
0
0
65535
exon-exon
6
Mus musculus

XM_006540090.2
1..1297
99.4%
-
7

NM_001310485.1
1289..1325
100.0%
-
15
1
0
0
intron-intron
7
Homo Sapiens

XM_011517264.2
1..61
100.0%
-
8

XM_011517264.2
58..270
98.6%
+
8
1
0
0
intron-intron
8
Homo Sapiens

XM_011517264.2
1..61
100.0%
-
8

XM_011517264.2
58..270
98.6%
+
8
1
0
0
intron-intron
9
Homo Sapiens

XM_017011644.2
1..110
97.3%
+
7

XM_011517264.2
97..811
98.9%
-
8
0
0
65535
exon-exon
10
Homo Sapiens

XR_929872.3
26..130
100.0%
+
9

XM_011517264.2
128..329
100.0%
+
8
1
0
0
intron-intron

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