Result for the search of Gene Name/NCBI ID(s): 'TPP1'

Total of fusion sequences: 11 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	SplGraphs DB123887 ANNOTATION OF CHIMERA FUSION GenBank ID: DB123887 FASTA Head Gene (1) Alignment: CD74 | OMIM: 142790 Tail Gene (2) Alignment: TPP1 | OMIM: 607998 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 972 5 - 150412676 150412751 9 1 oncogene, protein-coding 1200 11 - 6617332 6619423 5 1 protein-coding 575 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Pro-kuma_activ (PF09286, IPR015366, SM00944) 142 66 209 3.9e-36 110.700 Pro-kumamolisin, activation domain Peptidase_S8 (PF00082, IPR000209) 298 307 528 3.4e-08 19.100 Subtilase family Updated: 2019-02-21 Owner: ChiTaRS	CD74 E7EQJ3 E7ER71 E7ESL3 H0YBZ2 H0YBZ8 P04233 NM_001025159.2	1..76 100.0%	- 5	TPP1 A0A2R8Y6T9 A0A2R8Y7I4 A0A2R8Y7U1 A0A2R8YCK4 A0A2R8YD45 A0A2R8YD72 A0A2R8YDY1 A0A2R8YE64 A0A2R8YGD1 D3DQU2 E7EV34 E9PME9 E9PPA4 O14773 NM_000391.3	76..575 100.0%	- 11	1 0 0	exon-exon
2 Homo Sapiens	ChimerDB AV751006 ANNOTATION OF CHIMERA FUSION GenBank ID: AV751006 FASTA Head Gene (1) Alignment: TPP1 | OMIM: 607998 Tail Gene (2) Alignment: PRKAR1A | OMIM: 188830 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 1200 11 - 6613993 6614227 1 1 protein-coding 5573 17 + 68531415 68531725 1 1 oncogene, tumor suppressor, protein-coding 544 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Pro-kuma_activ (PF09286, IPR015366, SM00944) 142 53 196 1.5e-35 108.800 Pro-kumamolisin, activation domain Peptidase_S8 (PF00082, IPR000209) 298 303 515 1.5e-07 17.000 Subtilase family Updated: 2019-02-20 Owner: ChiTaRS	TPP1 A0A2R8Y6T9 A0A2R8Y7I4 A0A2R8Y7U1 A0A2R8YCK4 A0A2R8YD45 A0A2R8YD72 A0A2R8YDY1 A0A2R8YE64 A0A2R8YGD1 D3DQU2 E7EV34 E9PME9 E9PPA4 O14773 NM_000391.3	1..234 100.0%	- 11	PRKAR1A A1XGZ0 B2R5T5 K7EID3 K7EIE5 K7EJ40 K7EK41 K7EKR1 K7EM13 K7EMU2 K7EMZ6 K7EPB2 K7EPR5 K7EQK3 P10644 Q96P62 X6RAV4 NM_001276289.1	230..537 99.4%	+ 17	1 0 0	exon-exon
3 Homo Sapiens	ChimerDB DB256352 ANNOTATION OF CHIMERA FUSION GenBank ID: DB256352 FASTA Head Gene (1) Alignment: NFIC | OMIM: 600729 Tail Gene (2) Alignment: TPP1 | OMIM: 607998 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4782 19 + 3366586 3381844 2 1 oncogene, protein-coding 1200 11 - 6616346 6616854 8 1 protein-coding 561 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to NfI_DNAbd_pre-N (PF10524, IPR019548) 41 24 64 1.1e-31 94.900 Nuclear factor I protein pre-N-terminus Peptidase_S8 (PF00082, IPR000209) 298 136 334 1.3e-07 17.200 Subtilase family Updated: 2019-02-01 Owner: ChiTaRS	NFIC A0A286YEX4 P08651 Q13051 Q6FI30 XM_017026834.2	1..214 100.0%	+ 19	TPP1 A0A2R8Y6T9 A0A2R8Y7I4 A0A2R8Y7U1 A0A2R8YCK4 A0A2R8YD45 A0A2R8YD72 A0A2R8YDY1 A0A2R8YE64 A0A2R8YGD1 D3DQU2 E7EV34 E9PME9 E9PPA4 O14773 NM_000391.3	210..561 99.8%	- 11	1 0 0	exon-exon
4 Homo Sapiens	ChimerDB DA868262 ANNOTATION OF CHIMERA FUSION GenBank ID: DA868262 FASTA Head Gene (1) Alignment: MALAT1 | OMIM: 607924 Tail Gene (2) Alignment: TPP1 | OMIM: 607998 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 378938 11 + 65499045 65499243 2 1 oncogene, ncRNA 1200 11 - 6617666 6619429 4 1 protein-coding 571 hg38 Updated: 2019-02-21 Owner: ChiTaRS	MALAT1 NR_144568.1	1..200 98.5%	+ 11	TPP1 A0A2R8Y6T9 A0A2R8Y7I4 A0A2R8Y7U1 A0A2R8YCK4 A0A2R8YD45 A0A2R8YD72 A0A2R8YDY1 A0A2R8YE64 A0A2R8YGD1 D3DQU2 E7EV34 E9PME9 E9PPA4 O14773 NM_000391.3	200..571 99.2%	- 11	1 0 0	exon-exon
5 Homo Sapiens	AA368502 ANNOTATION OF CHIMERA FUSION GenBank ID: AA368502 FASTA Head Gene (1) Alignment: DNAJB9 | OMIM: 602634 Tail Gene (2) Alignment: TPP1 | OMIM: 607998 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4189 7 - 108573666 108573861 3 1 protein-coding 1200 11 + 6613766 6613818 13 1 protein-coding 247 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to DnaJ (PF00226, IPR001623, SM00271) 63 208 269 3.8e-30 90.200 DnaJ domain DUF1777 (PF08648, IPR013957) 171 308 393 0.00028 7.300 Protein of unknown function (DUF1777) Updated: 2019-02-02 Owner: ChiTaRS	DNAJB9 Q6FIF1 Q9UBS3 NM_012328.2	1..196 99.5%	- 7	TPP1 A0A2R8Y6T9 A0A2R8Y7I4 A0A2R8Y7U1 A0A2R8YCK4 A0A2R8YD45 A0A2R8YD72 A0A2R8YDY1 A0A2R8YE64 A0A2R8YGD1 D3DQU2 E7EV34 E9PME9 E9PPA4 O14773 NM_000391.3	195..247 100.0%	+ 11	2 174 0	exon-exon
6 Homo Sapiens	AW956976 ANNOTATION OF CHIMERA FUSION GenBank ID: AW956976 FASTA Head Gene (1) Alignment: DNAJB9 | OMIM: 602634 Tail Gene (2) Alignment: TPP1 | OMIM: 607998 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4189 7 - 108573666 108573861 3 1 protein-coding 1200 11 + 6613766 6613992 13 1 protein-coding 421 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to DnaJ (PF00226, IPR001623, SM00271) 63 208 269 4.4e-30 90.000 DnaJ domain DUF1777 (PF08648, IPR013957) 171 308 393 0.00032 7.200 Protein of unknown function (DUF1777) Updated: 2019-01-29 Owner: ChiTaRS	DNAJB9 Q6FIF1 Q9UBS3 NM_012328.2	1..196 99.5%	- 7	TPP1 A0A2R8Y6T9 A0A2R8Y7I4 A0A2R8Y7U1 A0A2R8YCK4 A0A2R8YD45 A0A2R8YD72 A0A2R8YDY1 A0A2R8YE64 A0A2R8YGD1 D3DQU2 E7EV34 E9PME9 E9PPA4 O14773 NM_000391.3	195..421 99.2%	+ 11	2 174 0	exon-exon
7 Homo Sapiens	BI027704 ANNOTATION OF CHIMERA FUSION GenBank ID: BI027704 FASTA Head Gene (1) Alignment: RNF213-AS1 Tail Gene (2) Alignment: TPP1 | OMIM: 607998 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 100294362 17 - 80393158 80393513 1 0 ncRNA 1200 11 + 6614106 6614238 13 1 protein-coding 486 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to NOB1_Zn_bind (PF08772, IPR014881) 72 1 38 7.7e-06 12.400 Nin one binding (NOB1) Zn-ribbon like PX (PF00787, IPR001683, SM00312) 113 486 534 0.026 0.800 PX domain AAA_22 (PF13401, IPR003593) 137 2042 2099 0.055 0.000 AAA domain AAA (PF00004, IPR003959, SM00382) 132 2465 2590 7.7e-07 15.800 ATPase family associated with various cellular activities (AAA) zf-C3HC4_3 (PF13920) 50 4043 4090 2.4e-09 23.300 Zinc finger, C3HC4 type (RING finger) Updated: 2019-02-21 Owner: ChiTaRS	RNF213-AS1 Q8WYU1 NR_029376.1	3..358 98.4%	- 17	TPP1 A0A2R8Y6T9 A0A2R8Y7I4 A0A2R8Y7U1 A0A2R8YCK4 A0A2R8YD45 A0A2R8YD72 A0A2R8YDY1 A0A2R8YE64 A0A2R8YGD1 D3DQU2 E7EV34 E9PME9 E9PPA4 O14773 NM_000391.3	354..486 97.8%	+ 11	2 66 0	intron-exon
8 Homo Sapiens	BI024546 ANNOTATION OF CHIMERA FUSION GenBank ID: BI024546 FASTA Head Gene (1) Alignment: RNF213-AS1 Tail Gene (2) Alignment: TPP1 | OMIM: 607998 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 100294362 17 - 80393158 80393489 1 0 ncRNA 1200 11 + 6614106 6614304 13 1 protein-coding 528 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to NOB1_Zn_bind (PF08772, IPR014881) 72 1 38 7.7e-06 12.300 Nin one binding (NOB1) Zn-ribbon like PX (PF00787, IPR001683, SM00312) 113 486 534 0.027 0.800 PX domain AAA_22 (PF13401, IPR003593) 137 2042 2099 0.055 0.000 AAA domain AAA (PF00004, IPR003959, SM00382) 132 2465 2590 7.7e-07 15.800 ATPase family associated with various cellular activities (AAA) zf-C3HC4_3 (PF13920) 50 4043 4090 2.4e-09 23.300 Zinc finger, C3HC4 type (RING finger) Updated: 2019-02-21 Owner: ChiTaRS	RNF213-AS1 Q8WYU1 NR_029376.1	2..334 98.5%	- 17	TPP1 A0A2R8Y6T9 A0A2R8Y7I4 A0A2R8Y7U1 A0A2R8YCK4 A0A2R8YD45 A0A2R8YD72 A0A2R8YDY1 A0A2R8YE64 A0A2R8YGD1 D3DQU2 E7EV34 E9PME9 E9PPA4 O14773 NM_000391.3	330..528 96.4%	+ 11	2 66 0	intron-exon
9 Homo Sapiens	BQ345796 ANNOTATION OF CHIMERA FUSION GenBank ID: BQ345796 FASTA Head Gene (1) Alignment: WDR45 | OMIM: 300526 Tail Gene (2) Alignment: TPP1 | OMIM: 607998 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 11152 X + 49075350 49075465 3 1 protein-coding 1200 11 + 6614090 6614364 13 1 protein-coding 381 hg38 Updated: 2019-02-17 Owner: ChiTaRS	WDR45 A0A024QYW6 A0A024QYX1 A0A0U1RQG6 A0A0U1RQJ7 A0A0U1RQM7 A0A0U1RQR1 A0A0U1RQS7 A0A0U1RR06 A0A0U1RR42 A0A0U1RRJ2 A0A0U1RRJ9 A0A1B0GV56 A0A1Y8EKY4 A6NM71 C9J0A8 C9J471 C9J5L0 C9J7Q8 C9JBX7 C9JE01 C9JUS5 C9JVT3 C9JYH8 G8JLI5 H0Y329 H7C4N7 H7C5B4 L0R5G8 Q9Y484 NM_007075.3	1..108 99.1%	+ X	TPP1 A0A2R8Y6T9 A0A2R8Y7I4 A0A2R8Y7U1 A0A2R8YCK4 A0A2R8YD45 A0A2R8YD72 A0A2R8YDY1 A0A2R8YE64 A0A2R8YGD1 D3DQU2 E7EV34 E9PME9 E9PPA4 O14773 NM_000391.3	106..381 98.2%	+ 11	1 0 0	exon-exon
10 Homo Sapiens	AA367977 ANNOTATION OF CHIMERA FUSION GenBank ID: AA367977 FASTA Head Gene (1) Alignment: LZTS3 | OMIM: 610484 Tail Gene (2) Alignment: TPP1 | OMIM: 607998 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 9762 20 - 3162669 3162753 1 1 tumor suppressor, protein-coding 1200 11 + 6614040 6614252 13 1 protein-coding 298 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to DUF812 (PF05667, IPR008530) 598 749 972 1.3e-08 20.200 Protein of unknown function (DUF812) Fez1 (PF06818) 198 904 1104 4e-64 202.800 Fez1 Updated: 2019-02-20 Owner: ChiTaRS	LZTS3 O60299 NM_001282533.1	1..85 100.0%	- 20	TPP1 A0A2R8Y6T9 A0A2R8Y7I4 A0A2R8Y7U1 A0A2R8YCK4 A0A2R8YD45 A0A2R8YD72 A0A2R8YDY1 A0A2R8YE64 A0A2R8YGD1 D3DQU2 E7EV34 E9PME9 E9PPA4 O14773 NM_000391.3	86..298 99.1%	+ 11	1 0 0	exon-exon

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