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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'TPD52L2'

Total of fusion sequences: 9 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens ChimerDB MALAT1
NR_144568.1
2..53
100.0%
+
11

XM_011529034.3
48..585
100.0%
+
20
1
0
0
exon-exon
Homo SapiensSplGraphs
NM_199360.2
1..403
99.8%
+
20

XM_011529034.3
397..544
100.0%
+
20
0
65535
65535
exon-intron
Homo Sapiens
XM_024448652.1
1..1106
100.0%
-
11

NM_199360.2
834..1126
97.5%
-
20
1
0
0
exon-intron
Homo Sapiens 1..107
98.2%
-
20
108..287
98.4%
-
20
0
65535
65535
exon-exon
Homo Sapiens
NM_199360.2
37..408
97.0%
+
20

XM_011516322.2
397..418
100.0%
-
7
1
0
0
exon-intron
Homo Sapiens
NM_004737.5
4..37
97.1%
-
22

NM_199360.2
29..442
100.0%
-
20
1
0
0
intron-exon
Homo Sapiens
NM_199360.2
161..203
100.0%
-
20

NM_022406.3
204..777
99.7%
+
5
1
0
0
exon-exon
Homo Sapiens
NM_199360.2
1..37
100.0%
+
20
NOTCH2NL
NM_203458.4
25..668
100.0%
+
1
1
0
0
intron-intron
Homo Sapiens
NM_182678.2
1..23
100.0%
+
2

NM_199360.2
19..161
100.0%
-
20
1
0
0
intron-exon

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