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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'TP53'

Total of fusion sequences: 7 (from 3,568,812 parsed EST/mRNAs. Last update: 2020-07-14 10:36:55)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
Gm40812
XR_872235.2
1..91
99.0%
+
11

XM_006533157.3
92..142
100.0%
+
11
1
0
0
exon-intron
2
Mus musculus

XM_006533157.3
1..1743
100.0%
+
11
Trp53-ps 41..1762
95.5%
+
17
3
10
29
exon-exon
3
Mus musculus

XM_006533157.3
1..1772
100.0%
+
11
Trp53-ps 70..1781
95.5%
+
17
3
0
0
exon-exon
4
Mus musculus

XM_006533157.3
1..1868
100.0%
+
11
Trp53-ps 70..1877
95.3%
+
17
3
0
0
exon-exon
5
Mus musculus

XM_006533157.3
1..687
97.8%
+
11

XM_006523247.3
669..714
97.3%
+
17
1
0
0
intron-intron
6
Mus musculus

XM_006533157.3
1..624
99.9%
+
11

NM_027711.1
596..629
100.0%
+
13
1
0
0
intron-intron
7
Mus musculus

XM_006510269.1
1..472
99.2%
+
9

XM_006533157.3
463..507
100.0%
+
11
1
0
0
exon-exon

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