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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'TNRC6A'

Total of fusion sequences: 23 (from 12,143,238 parsed EST/mRNAs. Last update: 2021-04-05 16:54:11)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
ChimerDB UBE2CP5
NR_144562.1
16..222
96.6%
-
19

XM_024450231.1
214..312
95.0%
+
16
1
0
0
exon-exon
2
Homo Sapiens

XM_024450231.1
1..27
100.0%
+
16

NM_030647.1
17..185
99.5%
+
7
1
0
0
intron-exon
3
Homo Sapiens

NM_030647.1
8..177
99.5%
-
7

NM_014494.3
167..194
100.0%
-
16
1
0
0
exon-intron
4
Homo Sapiens

XM_024450231.1
1..27
100.0%
+
16

NM_030647.1
17..185
99.5%
+
7
1
0
0
intron-exon
5
Homo Sapiens

NM_173653.3
16..141
98.5%
+
3

XM_005255257.4
134..481
99.2%
-
16
1
0
0
intron-intron
6
Homo Sapiens

XM_017023145.2
1..118
98.4%
+
16

NM_001615.3
113..528
96.3%
-
2
1
0
0
intron-intron
7
Homo Sapiens

NM_001310121.1
1..25
100.0%
-
12

XM_024450231.1
14..326
100.0%
-
16
1
0
0
intron-exon
8
Homo Sapiens

NM_031283.2
8..233
100.0%
+
2

NM_014494.3
125..248
96.0%
-
16
1
0
0
intron-intron
9
Homo Sapiens
CACNG3
O60359

NM_006539.3
1..11
97.4%
+
16

XM_017023145.2
12..76
97.4%
+
16
1
0
0
intron-intron
10
Homo Sapiens

XM_017023145.2
22..456
99.9%
+
16
LOC107984825
XR_001752109.1
457..588
99.9%
+
16
1
0
0
exon-exon

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