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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'TF'

Total of fusion sequences: 23 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens ChimerDB ZFAS1
NR_003604.3
1..75
100.0%
+
20

NM_001063.3
76..567
100.0%
+
3
1
0
0
intron-exon
Homo Sapiens
NM_001354703.1
163..738
99.9%
+
3

NM_001320114.1
715..752
100.0%
+
14
1
0
0
exon-intron
Homo Sapiens
XM_024446496.1
2..326
99.7%
-
6

NM_001354703.1
316..336
100.0%
-
3
1
0
0
exon-intron
Homo Sapiens
NM_001354703.1
9..433
99.8%
-
3
NEAT1
NR_028272.1
434..506
100.0%
+
11
1
0
0
intron-exon
Homo Sapiens
NM_001354703.1
18..432
100.0%
-
3
NEAT1
NR_028272.1
433..505
100.0%
+
11
1
0
0
intron-exon
Homo Sapiens LINC01239
NR_038977.1
17..54
100.0%
+
9

NM_001354703.1
52..342
98.0%
-
3
1
0
0
intron-exon
Homo Sapiens
NM_001354703.1
357..676
96.6%
+
3

XM_011536358.2
655..686
100.0%
-
14
1
0
0
exon-intron
Homo Sapiens
NM_001354703.1
14..227
99.1%
-
3
TTL
Q8NG68

XM_005263599.3
220..457
97.5%
+
2
2
28
0
exon-intron
Homo Sapiens
NM_001354703.1
14..227
99.1%
-
3
TTL
Q8NG68

XM_005263599.3
220..487
97.0%
+
2
2
28
0
exon-intron
Homo Sapiens
NM_001354703.1
1..583
99.2%
+
3

XM_017016152.1
580..601
95.5%
-
10
1
0
0
exon-intron

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