Result for the search of Gene Name/NCBI ID(s): 'TAF6'

Total of fusion sequences: 6 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	SplGraphs CB986850 ANNOTATION OF CHIMERA FUSION GenBank ID: CB986850 FASTA Head Gene (1) Alignment: LYZ | OMIM: 153450 Tail Gene (2) Alignment: TAF6 | OMIM: 602955 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 4069 12 + 69348381 69348526 1 1 protein-coding 6878 7 + 100109738 100109895 13 0 protein-coding 305 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Clat_adaptor_s (PF01217, IPR022775) 142 190 280 1.5e-08 20.900 Clathrin adaptor complex small chain Adap_comp_sub (PF00928, IPR008968) 264 315 595 1.7e-64 203.800 Adaptor complexes medium subunit family Updated: 2019-02-17 Owner: ChiTaRS	LYZ A0A0B4J259 B2R4C5 F8VV32 P61626 NM_000239.2	4..149 100.0%	+ 12	TAF6 A0A1D5RMS5 A4D299 C9J088 C9J7C4 C9JFL8 C9JHQ8 C9JI39 C9JIS2 C9JTY6 E5RHA1 E5RKA5 F8WEJ7 J3KR72 L8ECM7 P49848 XM_024446897.1	147..304 100.0%	+ 7	1 0 0	exon-intron
2 Homo Sapiens	BU184274 ANNOTATION OF CHIMERA FUSION GenBank ID: BU184274 FASTA Head Gene (1) Alignment: TAF6 | OMIM: 602955 Tail Gene (2) Alignment: TAF6 | OMIM: 602955 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6878 7 + 100108367 100108425 3 1 protein-coding 6878 7 - 100107157 100108127 16 1 protein-coding 823 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to Adap_comp_sub (PF00928, IPR008968) 264 189 416 1.1e-45 142.200 Adaptor complexes medium subunit family Fer4 (PF00037, IPR001450) 24 818 826 0.011 2.000 4Fe-4S binding domain Fer4_4 (PF12800, IPR001450) 17 957 977 0.0044 4.100 4Fe-4S binding domain Updated: 2019-02-17 Owner: ChiTaRS	TAF6 A0A1D5RMS5 A4D299 C9J088 C9J7C4 C9JFL8 C9JHQ8 C9JI39 C9JIS2 C9JTY6 E5RHA1 E5RKA5 F8WEJ7 J3KR72 L8ECM7 P49848 XM_024446897.1	41..99 100.0%	+ 7	TAF6 A0A1D5RMS5 A4D299 C9J088 C9J7C4 C9JFL8 C9JHQ8 C9JI39 C9JIS2 C9JTY6 E5RHA1 E5RKA5 F8WEJ7 J3KR72 L8ECM7 P49848 XM_024446897.1	87..756 99.2%	- 7	0 1846 5847	exon-exon
3 Homo Sapiens	BY798517 ANNOTATION OF CHIMERA FUSION GenBank ID: BY798517 FASTA Head Gene (1) Alignment: TAF6 | OMIM: 602955 Tail Gene (2) Alignment: TAF6 | OMIM: 602955 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6878 7 - 100107597 100109973 4 1 protein-coding 6878 7 - 100114214 100118914 3 1 protein-coding 507 hg38 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to TAF (PF02969, IPR004823, SM00803) 66 1011 1076 2.2e-35 107.000 TATA box binding protein associated factor (TAF) TAF6_C (PF07571, IPR011442) 90 1308 1397 1.6e-34 104.400 TAF6 C-terminal HEAT repeat domain CAP_N (PF01213, IPR013992) 317 1505 1557 0.002 3.700 Adenylate cyclase associated (CAP) N terminal Updated: 2019-01-25 Owner: ChiTaRS	TAF6 A0A1D5RMS5 A4D299 C9J088 C9J7C4 C9JFL8 C9JHQ8 C9JI39 C9JIS2 C9JTY6 E5RHA1 E5RKA5 F8WEJ7 J3KR72 L8ECM7 P49848 XM_024446897.1	1..425 99.8%	- 7	TAF6 A0A1D5RMS5 A4D299 C9J088 C9J7C4 C9JFL8 C9JHQ8 C9JI39 C9JIS2 C9JTY6 E5RHA1 E5RKA5 F8WEJ7 J3KR72 L8ECM7 P49848 XM_024446897.1	418..507 100.0%	- 7	0 1846 5847	exon-exon
4 Homo Sapiens	BF246464 ANNOTATION OF CHIMERA FUSION GenBank ID: BF246464 FASTA Head Gene (1) Alignment: RPL23 | OMIM: 603662 Tail Gene (2) Alignment: TAF6 | OMIM: 602955 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 9349 17 - 38850081 38853736 5 1 protein-coding 6878 7 + 100118352 100118676 2 0 protein-coding 808 hg38 Updated: 2019-01-04 Owner: ChiTaRS	RPL23 A0A024R1Q8 B9ZVP7 C9JD32 J3KT29 J3KTJ3 J3QQT9 P62829 NM_000978.3	2..501 97.6%	- 17	TAF6 A0A1D5RMS5 A4D299 C9J088 C9J7C4 C9JFL8 C9JHQ8 C9JI39 C9JIS2 C9JTY6 E5RHA1 E5RKA5 F8WEJ7 J3KR72 L8ECM7 P49848 XM_024446897.1	478..527 97.5%	+ 7	1 0 0	exon-intron
5 Homo Sapiens	CV413255 ANNOTATION OF CHIMERA FUSION GenBank ID: CV413255 FASTA Head Gene (1) Alignment: TAF6 | OMIM: 602955 Tail Gene (2) Alignment: SDK1 | OMIM: 607216 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6878 7 - 100124733 100124839 0 0 protein-coding 221935 7 - 3920441 3920568 0 0 protein-coding 229 hg38 Updated: 2019-04-10 Owner: ChiTaRS	TAF6 A0A1D5RMS5 A4D299 C9J088 C9J7C4 C9JFL8 C9JHQ8 C9JI39 C9JIS2 C9JTY6 E5RHA1 E5RKA5 F8WEJ7 J3KR72 L8ECM7 P49848 XM_024446898.1	3..108 99.1%	- 7	SDK1 A0A087WTQ6 F8W6X9 H7C255 Q7Z5N4 NM_152744.3	102..229 100.0%	- 7	1 0 0	intron-intron
6 Homo Sapiens	AW023997 ANNOTATION OF CHIMERA FUSION GenBank ID: AW023997 FASTA Head Gene (1) Alignment: RASSF2 | OMIM: 609492 Tail Gene (2) Alignment: TAF6 | OMIM: 602955 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 9770 20 - 4780023 4780365 1 1 oncogene, tumor suppressor, protein-coding 6878 7 - 100121118 100121156 1 0 protein-coding 397 hg38 Updated: 2019-02-07 Owner: ChiTaRS	RASSF2 P50749 XM_017028150.1	8..350 100.0%	- 20	TAF6 A0A1D5RMS5 A4D299 C9J088 C9J7C4 C9JFL8 C9JHQ8 C9JI39 C9JIS2 C9JTY6 E5RHA1 E5RKA5 F8WEJ7 J3KR72 L8ECM7 P49848 XM_024446896.1	344..382 100.0%	- 7	1 0 0	exon-intron

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