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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Susd6'

Total of fusion sequences: 8 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
SplGraphs
NM_001242419.1
3..136
100.0%
+
12

NM_012054.4
130..2501
100.0%
+
13
1
0
0
intron-exon
2
Mus musculus

NM_001242419.1
13..70
100.0%
-
12

NM_001242419.1
66..364
100.0%
+
12
2
675
22
exon-exon
3
Mus musculus

NM_001242419.1
54..410
100.0%
-
12

NM_001242419.1
401..677
99.7%
+
12
2
675
22
exon-exon
4
Mus musculus

NM_021099.3
1..5141
100.0%
+
5

NM_001242419.1
5138..5164
100.0%
+
12
1
0
0
exon-intron
5
Mus musculus
Gm9794
XR_140792.4
33..532
97.0%
-
6

NM_001242419.1
516..542
100.0%
+
12
1
0
0
exon-intron
6
Mus musculus

XM_017313458.1
4..34
100.0%
-
9

NM_001242419.1
34..488
100.0%
-
12
1
0
0
intron-exon
7
Mus musculus

NM_011321.3
29..847
99.4%
+
17

NM_001242419.1
847..879
100.0%
+
12
1
0
0
exon-intron
8
Mus musculus

NM_008129.4
21..779
97.4%
+
3

NM_001242419.1
767..798
100.0%
+
12
1
0
0
intron-intron

T o p