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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Spcs2'

Total of fusion sequences: 8 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

XM_006508117.3
4..523
100.0%
-
7
Spcs2-ps 144..576
96.8%
-
2
0
4453
6
exon-exon
2
Mus musculus

NM_025668.3
4..533
99.9%
-
7
Spcs2-ps 35..588
95.3%
-
2
0
4453
6
exon-exon
3
Mus musculus
D630045M09Rik 241..260
100.0%
-
13
242..263
95.5%
+
7
1
0
0
intron-intron
4
Mus musculus
D630045M09Rik 251..270
100.0%
-
13
252..273
95.5%
+
7
1
0
0
intron-intron
5
Mus musculus

XM_006508117.3
12..441
100.0%
-
7
Krt18
P05784

NM_010664.2
442..738
98.3%
+
15
1
0
0
exon-exon
6
Mus musculus
Krt18
P05784

NM_010664.2
18..322
100.0%
-
15

XM_006508117.3
323..753
98.0%
+
7
1
0
0
exon-exon
7
Mus musculus

XM_006508117.3
21..364
99.8%
-
7
Gm41472
XR_876158.1
361..434
96.8%
-
16
1
0
0
exon-intron
8
Mus musculus

XM_006508117.3
1..551
96.5%
-
7

XM_006535747.3
547..575
100.0%
+
5
1
0
0
exon-intron

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