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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Sod1'

Total of fusion sequences: 25 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus
SplGraphs
NM_011701.4
1..258
99.7%
+
2

NM_011434.1
254..796
98.6%
+
16
1
0
0
intron-intron
2
Mus musculus

NM_011434.1
7..607
99.9%
+
16
Gm38825 608..622
97.8%
+
6
6
0
45
intron-intron
3
Mus musculus

NM_011434.1
1..648
100.0%
+
16
Gm38825 647..661
97.6%
+
6
6
0
45
exon-intron
4
Mus musculus

NM_011434.1
5..637
100.0%
+
16
Gm38825 637..655
97.7%
+
6
6
0
0
exon-intron
5
Mus musculus
Gm8566 6..626
97.1%
+
6

NM_011434.1
15..640
99.4%
+
16
3
39
0
exon-exon
6
Mus musculus
Gm8566 15..598
97.5%
+
6

NM_011434.1
26..599
99.9%
+
16
3
39
0
exon-exon
7
Mus musculus

NM_011434.1
5..598
99.9%
+
16
Gm8566 136..674
96.2%
+
6
3
32
131
exon-exon
8
Mus musculus

NM_011434.1
1..611
99.7%
+
16
Gm38825 612..633
97.4%
+
6
6
7
3
intron-intron
9
Mus musculus

NM_011434.1
39..671
99.4%
+
16
Gm38825 671..687
97.1%
+
6
6
1
0
exon-intron
10
Mus musculus

NM_011434.1
13..710
100.0%
+
16
Gm38825 709..724
97.9%
+
6
0
1
3234
exon-intron

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