Result for the search of Gene Name/NCBI ID(s): 'Slc44a2'

Total of fusion sequences: 3 (from 12,143,238 parsed EST/mRNAs. Last update: 2021-04-05 16:54:11)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Mus musculus	SplGraphs AA589534 ANNOTATION OF CHIMERA FUSION GenBank ID: AA589534 FASTA Head Gene (1) Alignment: Slc44a2 Tail Gene (2) Alignment: Perp Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 68682 9 + 21347032 21348398 4 1 protein-coding 64058 10 + 18856200 18856424 1 1 protein-coding 591 mm10 Updated: 2019-05-28 Owner: ChiTaRS	Slc44a2 A0A1L1SS87 A0A1L1SU40 A0A1L1SVG6 Q8BY89 XM_006510575.2	20..368 97.7%	+ 9	Perp Q9JK95 NM_022032.4	367..591 99.6%	+ 10	1 0 0	exon-exon
2 Mus musculus	DV049654 ANNOTATION OF CHIMERA FUSION GenBank ID: DV049654 FASTA Head Gene (1) Alignment: Slc44a2 Tail Gene (2) Alignment: Smarcd1 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 68682 9 + 21354391 21355028 1 1 protein-coding 83797 15 - 99706469 99706932 0 0 934 mm10 Updated: 2019-06-16 Owner: ChiTaRS	Slc44a2 A0A1L1SS87 A0A1L1SU40 A0A1L1SVG6 Q8BY89 XM_006510575.2	21..658 100.0%	+ 9	Smarcd1 A0A2R8VHB7 A0A2R8VI06 A0A2R8VI28 A0A2R8VKP3 Q61466 Q68FH8 NM_031842.2	656..744 97.9%	- 15	1 0 0	exon-intron
3 Mus musculus	BG808722 ANNOTATION OF CHIMERA FUSION GenBank ID: BG808722 FASTA Head Gene (1) Alignment: Slc44a2 Tail Gene (2) Alignment: Gm9320 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 68682 9 - 21346860 21346920 1 1 protein-coding 668724 17 + 70875817 70876332 0 0 571 mm10 Updated: 2019-06-15 Owner: ChiTaRS	Slc44a2 A0A1L1SS87 A0A1L1SU40 A0A1L1SVG6 Q8BY89 XM_006510575.2	1..46 97.8%	- 9	Gm9320	36..571 95.8%	+ 17	1 0 0	exon-intron

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