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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'Slc38a1'

Total of fusion sequences: 8 (from 10,657,267 parsed EST/mRNAs. Last update: 2020-11-05 10:39:19)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_001166456.1
46..189
100.0%
+
15

NM_001166456.1
65..533
97.6%
-
15
1
0
0
exon-exon
2
Mus musculus

XM_011247830.2
1..4570
100.0%
+
X

NM_001166456.1
4569..4593
100.0%
-
15
1
0
0
exon-intron
3
Mus musculus

XM_011247830.2
1..4570
100.0%
+
X

NM_001166456.1
4569..4593
100.0%
-
15
1
0
0
exon-intron
4
Mus musculus

NM_001166456.1
12..2156
100.0%
-
15

XM_006521787.2
2133..2192
98.1%
+
16
1
0
0
exon-intron
5
Mus musculus

NM_001166456.1
26..533
95.7%
-
15

XM_017321487.1
533..584
96.8%
-
1
1
0
0
exon-intron
6
Mus musculus
Gm5113
Q3UGK8
1..44
96.9%
-
7

NM_001166456.1
10..167
100.0%
+
15
1
0
0
intron-exon
7
Mus musculus

XM_006530385.3
5..425
95.9%
+
5

NM_001166456.1
411..472
95.2%
+
15
1
0
0
intron-intron
8
Mus musculus

NM_001166456.1
25..391
99.2%
-
15

XM_006508786.2
370..451
95.3%
+
8
1
0
0
exon-intron

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