Result for the search of Gene Name/NCBI ID(s): 'Slc15a2'

Total of fusion sequences: 5 (from 1493742 parsed EST/mRNAs. Last update 2019-12-11 12:04:16)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Mus musculus	SplGraphs CJ065877 ANNOTATION OF CHIMERA FUSION GenBank ID: CJ065877 FASTA Head Gene (1) Alignment: Nrros Tail Gene (2) Alignment: Slc15a2 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 224109 16 - 32165380 32165438 1 1 protein-coding 57738 16 - 36760069 36762387 5 0 protein-coding 411 mm10 Updated: 2019-05-28 Owner: ChiTaRS	Nrros A0A338P6E7 D3Z2Y0 D3Z755 Q8BMT4 XM_006522074.3	2..60 100.0%	- 16	Slc15a2 E9PYQ9 E9Q0L2 E9Q329 E9QMN8 G3XA51 H6B8C3 H6B8C4 Q80XC0 Q8VEK9 Q9CXC0 Q9ES07 Q9JM03 NM_021301.3	61..400 99.8%	- 16	1 0 0	exon-intron	1HiC Hi-C contacts of chimeric junction Fusion Gene1 chromo- some1 junction start1 junction end1 Hi-C point1 Δ1 Gene2 chromo- some2 junction start2 junction end2 Hi-C point2 Δ2 Cell lines (Cell_ID,) PubMed(,s) 2 3 19 - - 32 - 8 25 - - 33 - 34 - CJ065877 Nrros 16 32165437 32165438 32160000 5437 Slc15a2 16 36760069 36760070 36770000 9930 Patski (CVCL_Y494), ES-C57BL/6 (CVCL_5746) 27432957, 28802249
2 Mus musculus	AY135563 ANNOTATION OF CHIMERA FUSION GenBank ID: AY135563 FASTA UniProtKB: Q7TQC0 DNA polymerase Q Head Gene (1) Alignment: Slc15a2 Tail Gene (2) Alignment: Polq Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 57738 16 - 36781571 36784759 3 1 protein-coding 77782 16 + 37013148 37094872 29 1 protein-coding 8021 mm10 Updated: 2019-05-28 Owner: ChiTaRS	Slc15a2 E9PYQ9 E9Q0L2 E9Q329 E9QMN8 G3XA51 H6B8C3 H6B8C4 Q80XC0 Q8VEK9 Q9CXC0 Q9ES07 Q9JM03 NM_021301.3	1..330 100.0%	- 16	Polq Q3U1F8 Q80XB7 Q8BGX6 Q8CGS6 NM_029977.2	331..8021 100.0%	+ 16	1 0 0	exon-exon	2HiC Hi-C contacts of chimeric junction Fusion Gene1 chromo- some1 junction start1 junction end1 Hi-C point1 Δ1 Gene2 chromo- some2 junction start2 junction end2 Hi-C point2 Δ2 Cell lines (Cell_ID,) PubMed(,s) 2 3 19 - - 32 - 8 25 - - 33 - 34 - AY135563 Slc15a2 16 36784758 36784759 36780000 4758 Polq 16 37013148 37013149 37010000 3148 Patski (CVCL_Y494), ES-C57BL/6 (CVCL_5746) 27432957, 28802249 AY135563 Slc15a2 16 36784758 36784759 36780000 4758 Polq 16 37013148 37013149 37020000 6851 Patski (CVCL_Y494), ES-C57BL/6 (CVCL_5746) 27432957, 28802249
3 Mus musculus	BG089607 ANNOTATION OF CHIMERA FUSION GenBank ID: BG089607 FASTA Head Gene (1) Alignment: Gm31893 Tail Gene (2) Alignment: Slc15a2 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 102634266 8 - 119052367 119052493 1 1 57738 16 + 36765106 36765587 0 0 protein-coding 479 mm10 Updated: 2019-06-12 Owner: ChiTaRS	Gm31893 XR_879243.2	4..29 96.6%	- 8	Slc15a2 E9PYQ9 E9Q0L2 E9Q329 E9QMN8 G3XA51 H6B8C3 H6B8C4 Q80XC0 Q8VEK9 Q9CXC0 Q9ES07 Q9JM03 NM_021301.3	15..479 97.4%	+ 16	1 0 0	exon-intron
4 Mus musculus	BU757185 ANNOTATION OF CHIMERA FUSION GenBank ID: BU757185 FASTA Head Gene (1) Alignment: Slc15a2 Tail Gene (2) Alignment: 2410003L11Rik Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 57738 16 + 36750616 36750637 1 1 protein-coding 69729 11 - 97618437 97622893 2 1 502 mm10 Updated: 2019-06-12 Owner: ChiTaRS	Slc15a2 E9PYQ9 E9Q0L2 E9Q329 E9QMN8 G3XA51 H6B8C3 H6B8C4 Q80XC0 Q8VEK9 Q9CXC0 Q9ES07 Q9JM03 NM_021301.3	10..31 100.0%	+ 16	2410003L11Rik NR_045496.1	19..368 100.0%	- 11	1 0 0	exon-exon
5 Mus musculus	BC017513 ANNOTATION OF CHIMERA FUSION GenBank ID: BC017513 FASTA Head Gene (1) Alignment: Slc15a2 Tail Gene (2) Alignment: Ccdc158 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 57738 16 - 36765108 36766067 0 0 protein-coding 320696 5 + 92614544 92614928 0 0 974 mm10 Updated: 2019-06-16 Owner: ChiTaRS	Slc15a2 E9PYQ9 E9Q0L2 E9Q329 E9QMN8 G3XA51 H6B8C3 H6B8C4 Q80XC0 Q8VEK9 Q9CXC0 Q9ES07 Q9JM03 NM_021301.3	1..960 100.0%	- 16	Ccdc158 A0A1D5RMH8 B2RQL1 Q8CDI6 XM_006534991.2	616..967 97.5%	+ 5	1 0 0	intron-intron

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