Result for the search of Gene Name/NCBI ID(s): 'STRN3'

Total of fusion sequences: 15 (from 12,143,238 parsed EST/mRNAs. Last update: 2021-04-05 16:54:11)

Organism	Fusion: Graphical View, Annotation, PPI network	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	Fusion type RNA	Hi-C, RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed(s)
		Name(s)1, transcript	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2, transcript	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,19	8	9,10,11	12,25	13,14,15	32	16	17
1 Homo Sapiens	SplGraphs AV655690 ANNOTATION OF CHIMERA FUSION GenBank ID: AV655690 FASTA Head Gene (1) Alignment: STRN3 | OMIM: 614766 Tail Gene (2) Alignment: MAP3K3 | OMIM: 602539 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 29966 14 - 31018732 31018837 17 0 protein-coding 4215 17 + 63671547 63671982 10 0 oncogene, protein-coding 680 hg38 Updated: 2019-02-20 Owner: ChiTaRS	STRN3 A0AV58 G3V340 G3V3G7 H0YJT2 H0YJZ4 Q13033 NM_001083893.1	10..114 99.1%	- 14	MAP3K3 J3KRN4 J3KTC4 J3QRB6 J3QS19 J3QS54 Q1PBM3 Q99759 XM_005257376.4	104..539 97.7%	+ 17	1 0 0	intron-intron
2 Homo Sapiens	BF246079 ANNOTATION OF CHIMERA FUSION GenBank ID: BF246079 FASTA Head Gene (1) Alignment: STRN3 | OMIM: 614766 Tail Gene (2) Alignment: HECTD1 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 29966 14 + 30949322 31008126 17 0 protein-coding 25831 14 + 31191945 31192015 2 0 protein-coding 871 hg38 Updated: 2019-01-04 Owner: ChiTaRS	STRN3 A0AV58 G3V340 G3V3G7 H0YJT2 H0YJZ4 Q13033 NM_001083893.1	2..219 96.2%	+ 14	HECTD1 A0A087WVU6 A0A087X2H1 G3V4V5 H0YJ72 H0YJD4 H0YJP0 H0YJV8 Q5XJ19 Q9BRJ0 Q9ULT8 XM_017021149.2	220..287 96.2%	+ 14	1 0 0	intron-intron	2HiC Hi-C contacts of chimeric junction Fusion Gene1 chromo- some1 junction start1 junction end1 Hi-C point1 Δ1 Gene2 chromo- some2 junction start2 junction end2 Hi-C point2 Δ2 Cell lines (Cell_ID,) PubMed(,s) 2 3 19 - - 32 - 8 25 - - 33 - 34 - BF246079 STRN3 14 31008125 31008126 31000794 7331 HECTD1 14 31191945 31191946 31190794 1151 GM12878 (CVCL_7526) 25497547 BF246079 STRN3 14 31008125 31008126 31010794 2668 HECTD1 14 31191945 31191946 31190794 1151 GM12878 (CVCL_7526) 25497547
3 Homo Sapiens	AV655638 ANNOTATION OF CHIMERA FUSION GenBank ID: AV655638 FASTA Head Gene (1) Alignment: STRN3 | OMIM: 614766 Tail Gene (2) Alignment: MAP3K3 | OMIM: 602539 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 29966 14 - 31018732 31018837 17 0 protein-coding 4215 17 + 63671547 63671997 10 0 oncogene, protein-coding 640 hg38 Updated: 2019-02-20 Owner: ChiTaRS	STRN3 A0AV58 G3V340 G3V3G7 H0YJT2 H0YJZ4 Q13033 NM_001083893.1	1..105 100.0%	- 14	MAP3K3 J3KRN4 J3KTC4 J3QRB6 J3QS19 J3QS54 Q1PBM3 Q99759 XM_005257376.4	95..545 100.0%	+ 17	1 0 0	intron-intron
4 Homo Sapiens	DT214933 ANNOTATION OF CHIMERA FUSION GenBank ID: DT214933 FASTA Head Gene (1) Alignment: STRN3 | OMIM: 614766 Tail Gene (2) Alignment: EIF3E | OMIM: 602210 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 29966 14 + 30895054 30895432 1 1 protein-coding 3646 8 - 108229131 108248716 6 1 oncogene, protein-coding 578 hg38 Updated: 2019-02-17 Owner: ChiTaRS	STRN3 A0AV58 G3V340 G3V3G7 H0YJT2 H0YJZ4 Q13033 NM_001083893.1	1..43 100.0%	+ 14	EIF3E A0A161SXE1 B2R806 B3KW56 E5RGA2 E5RHS5 E5RII3 E5RIP5 E5RIT4 E5RJ25 H0YAW4 H0YBP5 H0YBR5 P60228 Q6IAX5 NM_001568.2	29..578 100.0%	- 8	1 0 0	exon-exon
5 Homo Sapiens	BF369139 ANNOTATION OF CHIMERA FUSION GenBank ID: BF369139 FASTA Head Gene (1) Alignment: STRN3 | OMIM: 614766 Tail Gene (2) Alignment: DVL3 | OMIM: 601368 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 29966 14 + 30988827 30988894 17 0 protein-coding 1857 3 - 184157725 184157808 15 0 protein-coding 156 hg38 Updated: 2019-02-20 Owner: ChiTaRS	STRN3 A0AV58 G3V340 G3V3G7 H0YJT2 H0YJZ4 Q13033 NM_001083893.1	14..81 98.6%	+ 14	DVL3 A0A3B3ISG4 A0A3B3ITC6 F8WCF1 L8ECB2 Q92997 Q9UG07 XM_005247172.2	73..156 100.0%	- 3	1 0 0	intron-intron
6 Homo Sapiens	AI280231 ANNOTATION OF CHIMERA FUSION GenBank ID: AI280231 FASTA Head Gene (1) Alignment: STRN3 | OMIM: 614766 Tail Gene (2) Alignment: LINC00299 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 29966 14 - 30894995 30895056 1 1 protein-coding 339789 2 + 8268990 8269289 8 0 ncRNA 352 hg38 Updated: 2019-02-17 Owner: ChiTaRS	STRN3 A0AV58 G3V340 G3V3G7 H0YJT2 H0YJZ4 Q13033 NM_001083893.1	1..62 100.0%	- 14	LINC00299 Q6ZSB3 NR_152741.1	53..352 99.7%	+ 2	1 0 0	exon-intron
7 Homo Sapiens	BM724513 ANNOTATION OF CHIMERA FUSION GenBank ID: BM724513 FASTA Head Gene (1) Alignment: STRN3 | OMIM: 614766 Tail Gene (2) Alignment: ACTR8 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 29966 14 - 30958302 30958749 17 0 protein-coding 93973 3 - 53867466 53867711 13 1 protein-coding 685 hg38 Updated: 2019-02-21 Owner: ChiTaRS	STRN3 A0AV58 G3V340 G3V3G7 H0YJT2 H0YJZ4 Q13033 NM_001083893.1	1..448 100.0%	- 14	ACTR8 C9J7L6 H0Y849 Q9H981 NM_022899.4	440..685 99.2%	- 3	1 0 0	intron-exon
8 Homo Sapiens	AV682577 ANNOTATION OF CHIMERA FUSION GenBank ID: AV682577 FASTA Head Gene (1) Alignment: APOA2 | OMIM: 107670 Tail Gene (2) Alignment: STRN3 | OMIM: 614766 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 336 1 - 161222292 161223624 4 1 protein-coding 29966 14 + 30895051 30895105 18 1 protein-coding 666 hg38 Updated: 2019-01-31 Owner: ChiTaRS	APOA2 D3DVG8 P02652 Q76EI7 V9GYC1 V9GYE3 V9GYG9 V9GYM3 V9GYS1 NM_001643.1	1..470 100.0%	- 1	STRN3 A0AV58 G3V340 G3V3G7 H0YJT2 H0YJZ4 Q13033 NM_001083893.1	467..508 100.0%	+ 14	1 0 0	exon-exon
9 Homo Sapiens	BP429271 ANNOTATION OF CHIMERA FUSION GenBank ID: BP429271 FASTA Head Gene (1) Alignment: ASTN2 | OMIM: 612856 Tail Gene (2) Alignment: STRN3 | OMIM: 614766 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 23245 9 - 117180628 117180770 2 0 oncogene, protein-coding 29966 14 + 30969435 30969891 3 0 protein-coding 338 hg38 Updated: 2016-09-30 Owner: ChiTaRS	ASTN2 B2RCB6 B7ZKP3 B7ZKP4 B7ZKP5 H0Y3A8 H7C3I6 O75129 X6R5P2	10..153 97.3%	- 9	STRN3 A0AV58 G3V340 G3V3G7 H0YJT2 H0YJZ4 Q13033	134..165 100.0%	+ 14	1 0 0	intron-intron
10 Homo Sapiens	BI494634 ANNOTATION OF CHIMERA FUSION GenBank ID: BI494634 FASTA Head Gene (1) Alignment: STRN3 | OMIM: 614766 Tail Gene (2) Alignment: RNF144A Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 29966 14 + 31009605 31009655 17 0 protein-coding 9781 2 - 7043708 7044094 1 1 tumor suppressor, protein-coding 409 hg38 Updated: 2019-02-17 Owner: ChiTaRS	STRN3 A0AV58 G3V340 G3V3G7 H0YJT2 H0YJZ4 Q13033 NM_001083893.1	3..35 97.0%	+ 14	RNF144A C9JLH4 H7C3G0 P50876 NM_001349184.1	18..402 100.0%	- 2	1 0 0	intron-exon

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