Search Database Collection

Result for the search: Gene Name/NCBI ID(s): 'SRP14'

Total of fusion sequences: 6 (from 393,531 parsed EST/mRNAs. Last update 2018-11-20)

Organism	Fusion: Graphical View, Annotation, PPI	Head Gene (1)			Tail Gene (2)			Rank, Deviation: Eloc(x) Sloc(y)	RNAseq, Mass-spec evidences	Cancer Breakpoint, PubMed, iHOP reference
		Name(s)1	Start1..End1 Ident1%	Strand1 Chrom1	Name(s)2	Start2..End2 Ident2%	Strand2 Chrom2
1	2	3	4,5,6	7,17	8	9,10,11	12,25	13,14,15	16	17
Homo Sapiens	ChimerDB BQ015130 ANNOTATION OF CHIMERA FUSION GenBank ID: BQ015130 FASTA Head Gene (1) Alignment: SRP14 | OMIM: 600708 Tail Gene (2) Alignment: C1orf198 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6727 15 + 40328242 40329550 NA NA protein-coding 84886 1 + 230973433 230973578 NA NA protein-coding NA hg19 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to SRP14 (PF02290, IPR003210) 95 4 94 8.1e-29 86.200 Signal recognition particle 14kD protein IHABP4_N (PF16174, IPR032381) 170 88 154 0.00024 7.900 Intracellular hyaluronan-binding protein 4 N-terminal Updated: 2012-12-12 Owner: ChiTaRS	SRP14 H0YLA2 H0YLW0 P37108	18..551 99.7%	+ 15	C1orf198 A0A024R3S1 E5RFY9 E5RI90 Q9H425	545..690 98.7%	+ 1	1 0 0
Homo Sapiens	SplGraphs CN337981 ANNOTATION OF CHIMERA FUSION GenBank ID: CN337981 FASTA Head Gene (1) Alignment: SRP14 | OMIM: 600708 Tail Gene (2) Alignment: EME2 | OMIM: 610886 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6727 15 - 40330565 40331323 NA NA protein-coding 197342 16 + 1824946 1825879 NA NA protein-coding NA hg19 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to ERCC4 (PF02732, IPR006166, SM00891) 157 87 167 2.3e-08 20.500 ERCC4 domain Updated: 2012-12-12 Owner: ChiTaRS	SRP14 H0YLA2 H0YLW0 P37108	2..135 100.0%	- 15	EME2 A4GXA9 H3BSZ6 H3BV62	136..615 100.0%	+ 16	1 0 0
Homo Sapiens	FN165361 ANNOTATION OF CHIMERA FUSION GenBank ID: FN165361 FASTA Head Gene (1) Alignment: SRP14 | OMIM: 600708 Tail Gene (2) Alignment: PIP5KL1 | OMIM: 612865 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6727 15 + 40036466 40037008 3 0 protein-coding 138429 9 - 127931789 127931808 1 0 protein-coding 90 hg38 Updated: 2018-09-04 Owner: ChiTaRS	SRP14 H0YLA2 H0YLW0 P37108	6..68 96.1%	+ 15	PIP5KL1	59..78 100.0%	- 9	1 0 0
Homo Sapiens	BE836999 ANNOTATION OF CHIMERA FUSION GenBank ID: BE836999 FASTA Head Gene (1) Alignment: NUMB | OMIM: 603728 Tail Gene (2) Alignment: SRP14 | OMIM: 600708 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 8650 14 + 73753961 73759574 NA NA tumor suppressor 6727 15 + 40331128 40331374 NA NA protein-coding NA hg19 Domains of the full fusion Envelope E-value Score Description name (Pfam, InterPro, SMART) length from to PID (PF00640, IPR006020, SM00462) 140 39 171 2.3e-39 120.900 Phosphotyrosine interaction domain (PTB/PID) Updated: 2012-12-12 Owner: ChiTaRS	NUMB A0A024R681 A0A024R684 A0A024R6C4 A0A024R6F4 G3V3M5 G3V3R1 G3V3Z8 G3V433 G3V4S6 P49757	35..229 100.0%	+ 14	SRP14 H0YLA2 H0YLW0 P37108	218..320 99.1%	+ 15	1 0 0
Homo Sapiens	AA984265 ANNOTATION OF CHIMERA FUSION GenBank ID: AA984265 FASTA Head Gene (1) Alignment: SRP14 | OMIM: 600708 Tail Gene (2) Alignment: ABCB11 | OMIM: 603201 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6727 15 + 40331085 40331369 NA NA protein-coding 8647 2 - 169869119 169869435 NA NA protein-coding NA hg19 Updated: 2012-12-12 Owner: ChiTaRS	SRP14 H0YLA2 H0YLW0 P37108	1..141 100.0%	+ 15	ABCB11 H7C486 O95342 Q53S60	142..458 99.4%	- 2	1 0 0
Homo Sapiens	AX188272 ANNOTATION OF CHIMERA FUSION GenBank ID: AX188272 FASTA Head Gene (1) Alignment: SRP14 | OMIM: 600708 Tail Gene (2) Alignment: OLFML1 Qsize UCSC Version Location: exons highlight1 Location: exons highlight2 Entrez GeneID1 chromo- some1 strand1 start_loc1 end_loc1 total1 overlap1 Entrez GeneID2 chromo- some2 strand2 start_loc2 end_loc2 total2 overlap2 18 19 7 20 21 22 23 - 24 25 12 26 27 28 29 - 30 31 6727 15 - 40036418 40039154 5 1 protein-coding 283298 11 + 7485547 7511365 4 0 protein-coding 3096 hg38 Updated: 2018-07-07 Owner: ChiTaRS	SRP14 H0YLA2 H0YLW0 P37108	26..389 99.2%	- 15	OLFML1	383..3096 99.9%	+ 11	1 0 0