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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'SRI'

Total of fusion sequences: 10 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo SapiensSplGraphs
NM_003130.3
4..251
100.0%
-
7

NM_012242.3
252..823
98.1%
+
10
1
0
0
exon-exon
Homo Sapiens ChimerDB
NM_003130.3
1..220
100.0%
-
7
PTRF
Q6NZI2

NM_012232.5
217..648
96.3%
-
17
1
0
0
exon-exon
Homo Sapiens ChimerDB
NM_006432.3
1..317
99.4%
-
14

NM_003130.3
318..623
99.7%
-
7
1
0
0
exon-exon
Homo Sapiens ChimerDB
NM_003130.3
1..324
99.7%
-
7

NM_005768.5
324..632
99.1%
-
12
1
0
0
exon-exon
Mus musculusSplGraphs Sri
Q6P069

NM_001080974.2
1..344
99.8%
+
5

XR_873126.2
338..439
100.0%
+
13
1
0
0
intron-intron
Mus musculus Sri
Q6P069

NM_025618.3
19..448
99.8%
+
5

XM_006522960.3
402..479
97.8%
-
16
1
0
0
exon-intron
Mus musculus Sri
Q6P069

NM_001080974.2
9..795
99.7%
+
5

XR_001781161.1
787..808
100.0%
+
1
1
0
0
exon-intron
Homo Sapiens 1..24
100.0%
+
9
2..191
98.5%
+
7
1
0
0
intron-intron
Homo Sapiens
NM_198901.1
1..579
99.9%
+
7
SRIP3 570..596
100.0%
+
Y
1
0
0
exon-exon
Homo Sapiens
NM_003130.3
1..592
99.4%
+
7
LOC102723885
NR_120517.1
593..730
99.4%
+
7
1
0
0
intron-intron

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