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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'SREBF2'

Total of fusion sequences: 28 (from 1,389,894 parsed EST/mRNAs. Last update 2019-07-07)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens
NR_103834.1
11..68
95.2%
-
22

XM_024452250.1
69..94
95.2%
-
22
1
0
0
intron-intron BREAKPOINTs
25500544
Homo Sapiens
NM_001288954.1
34..123
98.9%
-
14

NR_103834.1
116..428
99.1%
-
22
1
0
0
exon-intron
Homo Sapiens TSPOAP1-AS1
NR_038410.1
48..286
100.0%
+
17

NR_103834.1
287..443
100.0%
-
22
1
0
0
intron-exon
Homo Sapiens 2..551
100.0%
-
22
534..556
95.7%
-
2
1
0
0
exon-exon
Homo Sapiens 2..550
100.0%
-
22
533..555
95.7%
-
2
1
0
0
exon-exon
Homo Sapiens
NR_103834.1
3..157
100.0%
+
22

XM_017022311.2
151..287
98.6%
+
15
1
0
0
exon-intron
Homo Sapiens
NR_103834.1
11..385
98.7%
+
22

NM_001348988.1
379..438
96.5%
+
4
1
0
0
intron-intron
Homo Sapiens
NR_103834.1
1..313
97.2%
+
22

NM_015231.2
295..505
95.8%
+
11
1
0
0
intron-intron
Homo Sapiens
XM_005272239.2
207..298
95.3%
-
9

NR_103834.1
280..578
97.0%
+
22
1
0
0
intron-exon
Homo Sapiens LOC101927572
NM_001347907.1
1..79
100.0%
+
19

NR_103834.1
78..297
99.6%
-
22
1
0
0
intron-exon

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