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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SREBF2'

Total of fusion sequences: 28 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

NR_103834.1
11..68
95.2%
-
22

XM_024452250.1
69..94
95.2%
-
22
1
0
0
intron-intron BREAKPOINTs
25500544
2
Homo Sapiens

NR_103834.1
2..166
95.7%
-
22

NM_001545.2
24..420
97.3%
+
17
1
0
0
intron-intron
3
Homo Sapiens

NR_103834.1
32..81
96.0%
+
22

NR_103834.1
78..412
100.0%
-
22
2
651
623
intron-intron
4
Homo Sapiens

NR_103834.1
9..343
98.8%
-
22

NR_103834.1
335..527
99.0%
+
22
2
651
623
exon-exon
5
Homo Sapiens

NR_103834.1
1..62
95.3%
-
22
LOC102723665
NR_135921.1
13..376
99.8%
+
10
2
2
0
intron-exon
6
Homo Sapiens

NR_103834.1
1..64
95.5%
-
22
LOC102723665
NR_135921.1
15..329
100.0%
+
10
2
2
0
intron-exon
7
Homo Sapiens
2..551
100.0%
-
22
534..556
95.7%
-
2
1
0
0
exon-exon
8
Homo Sapiens
2..550
100.0%
-
22
533..555
95.7%
-
2
1
0
0
exon-exon
9
Homo Sapiens

ENST00000471841
1..258
100.0%
-
3

NR_103834.1
258..390
100.0%
-
22
1
0
0
exon-intron
10
Homo Sapiens

ENST00000471841
1..258
99.7%
-
3

NR_103834.1
258..440
100.0%
-
22
1
0
0
exon-intron

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