Search Database Collection

 

Choose parameters to search by

Updates:

Search filters
Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SREBF1'

Total of fusion sequences: 10 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

XM_024448138.1
1..27
100.0%
-
10

NM_001321096.2
18..436
99.6%
+
17
1
0
0
intron-exon
2
Homo Sapiens

XM_017024971.1
12..360
99.2%
+
17

NM_001005291.2
360..468
99.1%
+
17
1
0
0
exon-exon
3
Homo Sapiens

NM_001005291.2
1..86
100.0%
+
17

XM_011516915.2
70..91
95.5%
+
8
1
0
0
exon-intron
4
Homo Sapiens

NM_001005291.2
8..142
100.0%
-
17

NM_006073.3
139..162
100.0%
-
6
1
0
0
exon-intron
5
Homo Sapiens

NM_001277115.1
1..26
100.0%
+
7

NM_001005291.2
21..108
98.9%
+
17
1
0
0
intron-exon
6
Homo Sapiens

XM_006711802.3
1..25
96.0%
-
1

NM_001005291.2
18..108
96.3%
+
17
1
0
0
intron-exon
7
Homo Sapiens
LOC105373454
XR_001739302.1
1..24
100.0%
-
2

NM_001005291.2
10..117
97.2%
+
17
1
0
0
exon-exon
8
Homo Sapiens

NM_001005291.2
1..17
96.9%
-
17

NM_030665.3
18..128
96.9%
-
17
1
0
0
exon-exon
9
Homo Sapiens

XM_011510492.3
1..385
98.7%
+
2

NM_001005291.2
381..499
99.2%
-
17
1
0
0
intron-exon
10
Homo Sapiens

NM_001005291.2
14..135
99.2%
+
17

NM_021640.3
135..258
100.0%
+
12
1
0
0
exon-exon

T o p