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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SPTLC2'

Total of fusion sequences: 11 (from 1493742 parsed EST/mRNAs. Last update 2019-12-05 16:32:10)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens

NM_004863.3
1..257
100.0%
-
14

NM_004863.3
254..320
100.0%
+
14
1
0
0
exon-exon
2
Homo Sapiens

NM_004863.3
5..274
100.0%
-
14

NM_004863.3
271..337
100.0%
+
14
1
0
0
exon-exon
3
Homo Sapiens

NM_004863.3
5..28
95.9%
+
14

NM_001145432.1
20..442
99.8%
-
4
1
0
0
intron-exon
4
Homo Sapiens

NM_004863.3
7..144
95.2%
-
14
SLC16A1-AS1
ENST00000627431
34..363
98.5%
-
1
1
0
0
intron-intron
5
Homo Sapiens

NM_004863.3
14..107
99.0%
+
14

NM_001101.4
92..182
97.9%
+
7
1
0
0
exon-exon
6
Homo Sapiens

XM_011537364.2
1..213
95.5%
-
14

NM_004863.3
214..244
95.5%
-
14
1
0
0
intron-intron
7
Homo Sapiens

XM_011518944.2
6..229
97.8%
+
9

NM_004863.3
230..402
95.9%
+
14
1
0
0
exon-exon
8
Homo Sapiens

NM_004863.3
9..88
96.0%
+
14
LOC102724849
NR_110607.1
62..113
95.0%
-
2
1
0
0
intron-intron
9
Homo Sapiens

NM_004863.3
1..59
98.4%
+
14
Z96074.1 20..83
95.4%
-
X
1
0
0
intron-intron
10
Homo Sapiens

NM_014685.3
1..498
99.0%
+
16

NM_004863.3
485..509
95.9%
-
14
1
0
0
exon-intron

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