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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'SPDL1'

Total of fusion sequences: 9 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo SapiensSplGraphs
NM_001329643.1
1..141
100.0%
+
5

NM_001330724.1
137..335
100.0%
-
4
1
0
0
exon-exon
Homo Sapiens ChimerDB
NM_001329643.1
1..140
100.0%
+
5

NM_001330724.1
136..350
99.6%
-
4
1
0
0
exon-exon
Homo Sapiens
NM_001329643.1
19..2062
99.7%
+
5

NM_001329643.1
2060..2162
100.0%
+
5
0
20889
11217
exon-exon
Homo Sapiens
NM_001329643.1
12..66
100.0%
-
5

NM_001329643.1
61..240
100.0%
+
5
1
0
0
exon-exon
Homo Sapiens
NM_001329643.1
12..66
100.0%
-
5

NM_001329643.1
61..240
100.0%
+
5
1
0
0
exon-exon
Mus musculus
NM_027411.2
1..2488
100.0%
-
11
Gm34420
XR_379003.1
2487..2508
100.0%
+
8
1
0
0
exon-intron
Homo Sapiens 1..528
98.7%
+
5
509..531
100.0%
-
13
1
0
0
intron-intron
Homo Sapiens
NM_003687.3
44..194
96.7%
+
5

NM_001329643.1
186..213
100.0%
-
5
1
0
0
exon-intron
Mus musculus 3..30
100.0%
+
12

NM_027411.2
25..600
98.6%
+
11
1
0
0
intron-exon

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