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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SOD1'

Total of fusion sequences: 17 (from 2006899 parsed EST/mRNAs. Last update 2020-01-28 15:35:44)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Homo Sapiens
SplGraphs
NM_000454.4
3..365
100.0%
+
21

NM_001277224.1
357..418
98.4%
-
1
1
0
0
exon-exonSpes-1
2
Homo Sapiens
LOC646588
XR_002956546.1
1..28
100.0%
-
7

NM_000454.4
15..376
99.2%
-
21
2
1
0
intron-exon
3
Homo Sapiens

NM_000454.4
11..371
100.0%
+
21
LOC646588
XR_001745142.2
358..386
100.0%
+
7
2
1
0
exon-intron
4
Homo Sapiens

NM_001013848.3
1..32
100.0%
+
10

NM_000454.4
18..440
95.1%
-
21
2
0
201
intron-exon
5
Homo Sapiens

NM_000454.4
1..635
98.1%
+
21

XM_017009229.2
631..656
100.0%
-
5
1
0
0
exon-intron
6
Homo Sapiens

NM_032048.2
1..26
100.0%
+
18

NM_000454.4
22..189
98.9%
-
21
1
0
0
intron-exon
7
Homo Sapiens

NM_000454.4
1..689
98.7%
+
21

XM_006712140.4
684..710
100.0%
+
2
1
0
0
exon-intron
8
Homo Sapiens
AC024592.3 1..33
100.0%
-
19

NM_000454.4
24..220
99.0%
-
21
1
0
0
intron-exon
9
Homo Sapiens

NM_000454.4
23..91
98.6%
+
21
LOC101928809
NR_125906.1
87..175
100.0%
+
4
1
0
0
exon-intron
10
Homo Sapiens

NM_000454.4
56..176
99.2%
+
21

NM_005969.3
169..413
99.6%
+
11
1
0
0
exon-exon

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