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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search: Gene Name/NCBI ID(s): 'SNX6'

Total of fusion sequences: 19 (from 1,393,046 parsed EST/mRNAs. Last update 2019-09-04)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15-1617
Homo Sapiens
NM_001321483.1
1..526
100.0%
+
19

NM_152233.3
49..533
95.3%
-
14
2
39
528
exon-intronBREAKPOINTs
29196615
Homo Sapiens
NM_001321485.1
1..849
100.0%
+
19

NM_152233.3
338..864
95.1%
-
14
2
39
528
exon-intronBREAKPOINTs
29196615
Homo Sapiens
NM_001321485.1
3..101
99.0%
+
19

NM_152233.3
9..114
95.3%
-
14
0
280
8684
exon-intronBREAKPOINTs
29196615
Homo Sapiens
NM_152233.3
26..178
100.0%
-
14

XM_017022700.2
174..579
99.8%
-
15
1
0
0
exon-exonBREAKPOINTs
29099951
Homo Sapiens
NM_001002231.2
1..873
99.9%
+
19

NM_152233.3
863..901
100.0%
+
14
1
0
0
exon-intron
Homo Sapiens
NM_001002231.2
1..873
99.9%
+
19

NM_152233.3
863..901
100.0%
+
14
1
0
0
exon-intron
Homo Sapiens
NM_003255.4
4..134
100.0%
-
17

NM_152233.3
125..154
96.7%
+
14
1
0
0
exon-intron
Homo Sapiens
NM_152233.3
8..201
95.9%
-
14

XM_006724383.3
186..216
100.0%
-
22
1
0
0
intron-intron
Homo Sapiens NDUFV3
P56181

ENST00000340344
1..69
100.0%
-
21

NM_152233.3
8..100
96.0%
+
14
1
0
0
exon-intron
Homo Sapiens CTC-329D1.2 46..148
97.1%
-
5

NM_152233.3
123..247
96.8%
+
14
1
0
0
intron-intron
Homo Sapiens
NM_152233.3
29..528
95.0%
+
14

XR_001753747.1
528..2258
100.0%
-
19
1
0
0
intron-exon
Homo Sapiens
NM_152233.3
1..31
96.7%
-
14

XM_006721601.4
17..370
97.4%
+
17
1
0
0
intron-exon
Homo Sapiens AP001372.1 1..25
100.0%
-
11

NM_152233.3
26..275
100.0%
+
14
1
0
0
intron-exon
Homo Sapiens TPT1-AS1
NR_024458.1
1..322
97.9%
-
13

NM_152233.3
309..336
100.0%
+
14
1
0
0
intron-intron
Homo Sapiens
XM_017016208.2
19..104
95.6%
-
10

NM_152233.3
89..276
97.2%
-
14
1
0
0
intron-intron
Homo Sapiens NDST4
Q9H3R1

NM_022569.2
1..336
97.8%
-
4

NM_152233.3
22..437
99.1%
+
14
1
0
0
intron-exon
Homo Sapiens
NM_152233.3
2..114
96.5%
+
14

XM_005266303.3
105..384
100.0%
+
13
1
0
0
intron-exon
Homo Sapiens
XM_011537133.2
1..25
100.0%
+
14

NM_152233.3
15..290
99.3%
+
14
1
0
0
intron-exon
Homo Sapiens SRP54-AS1
NR_151701.1
1..162
97.9%
-
14

NM_152233.3
163..189
97.9%
-
14
1
0
0
intron-intron

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