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Rank: Junction Consistence: Hi-C Sense-ANTIsense

Mass-spec hits Read-through chimeras Breakpoints RNAseq evidence
UniProtKB hits
Organisms
Homo Sapiens Mus musculus D.Melanogaster
Rattus Norvegicus Bos Taurus Danio Rerio
Saccharomyces Cerevisiae Sus ScrofaAll organisms

Result for the search of Gene Name/NCBI ID(s): 'SNRNP200'

Total of fusion sequences: 6 (from 3,500,620 parsed EST/mRNAs. Last update 2020-05-11 17:25:38)

Organism Fusion:
Graphical View,
Annotation,
PPI network
Head Gene (1) Tail Gene (2) Rank,
Deviation:
Eloc(x)
Sloc(y)
Fusion type RNA Hi-C,
RNAseq,
Mass-spec
evidences
Cancer
Breakpoint,
PubMed(s)
Name(s)1,
transcript
Start1..End1
Ident1%
Strand1
Chrom1
Name(s)2,
transcript
Start2..End2
Ident2%
Strand2
Chrom2
1234,5,67,1989,10,1112,2513,14,15321617
1
Mus musculus

NM_177214.4
1..6740
100.0%
+
2

XM_006515822.3
6727..6755
100.0%
-
12
1
0
0
exon-intron
2
Mus musculus

NM_177214.4
1..2927
99.9%
+
2

NM_001271018.1
2920..2942
100.0%
-
11
2
0
87
exon-intron
3
Mus musculus

NM_177214.4
12..2852
99.9%
+
2

NM_001271018.1
2845..2867
100.0%
-
11
2
0
87
exon-intron
4
Mus musculus
Neat1
NR_003513.3
1..143
99.4%
-
19

NM_177214.4
139..2222
99.9%
+
2
1
0
0
exon-exon
5
Mus musculus
Neat1
NR_003513.3
1..143
99.4%
-
19

NM_177214.4
139..711
99.2%
+
2
1
0
0
exon-exon
6
Mus musculus

NM_177214.4
87..794
98.9%
+
2

NM_023202.4
789..879
96.6%
+
17
1
0
0
exon-exon

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